Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03197 ATGGGTATTTCTAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAAAAGGCTTGGAGAAAGAAGAGAAAGTATGAGCTTGGGCGTCAGGCAGCAAACACCAAGTTATCAAGCAACAAGACAATCAGGAGGATTCGTGTTAGAGGTGGCAATGTTAAATGGAGGGCATTGAGGCTGGATACTGGCAATTACTCATGGGGTAGTGAAGCAGTTACTCGCAAGACTCGTATTCTAGATGTTGTTTACAATGCCTCAAACAACGAGCTTGTGCGAACTCAGACCCTGGTCAAGAGTGCTATTGTCCAGGTTGATGCTGCTCCTTTCAGGCAGTGGTACCTTCAGCACTATGGTGTTGAAATTGGTAGAAAAAAGAAAGTGGCAGCCAAGAAGGATTCTACTGAGGAAGGTGAGGCTGCTGCTGAAGAAACTAAGAAAAGTAACCATGTGCAGAGAAAACTTGAGAAACGCCAGAAAGATCGTAATCTTGACTCCCACATTGAAGAGCAATTTGGTGGTGGGCGATTGTTGGCCTGTATTTCTTCTCGTCCCGGACAATGTGGCAGGGCTGATGGGTACATTCTTGAAGGTAAGGAGCTGGAGTTTTACATGAAGAAACTCCAGAGGAAGAAGGGAAAGGGTGCTGCTTAA 654 0.4633 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQAANTKLSSNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYLQHYGVEIGRKKKVAAKKDSTEEGEAAAEETKKSNHVQRKLEKRQKDRNLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03197 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 - -
Gma08g03197 217 MobiDBLite consensus disorder prediction 1 25 - -
Gma08g03197 217 MobiDBLite consensus disorder prediction 11 25 - -
Gma08g03197 217 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Gma08g03197 217 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Gma08g03197 217 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Gma08g03197 217 CDD Ribosomal_S8e_like 5 196 - -
Gma08g03197 217 MobiDBLite consensus disorder prediction 133 166 - -
Gma08g03197 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 IPR001047 GO:0003735|GO:0005840|GO:0006412
Gma08g03197 217 Gene3D - 161 214 - -
Gma08g03197 217 Gene3D - 32 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03197 Gma-Chr8 48728299 48730603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03197 1 205 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.466 2.02e-125 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03197 K02995 - gmx:100813170 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00751 18 8071483 8073590 Gma08g03197 08 48728299 48730603 GST