Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03159 ATGGGTAGGGATCAGAAAAGTGTGGTAGCTATGGTTGGCCAGGAGAGAAAAACAAACAAGAAAAATGGGTCTCTTGGGTTTAGGTCCATTTTCATGCATGCCGATGGCAAAGATTTGTTTCTTATGGTTTTAGGTACTATTGGGGCAGTTGGGGAAGGCTTGACCACCCCTCTAGTGTTGTATATCAGTAGCCGCATGATGAATAACATTGGAAGTTCCTCTAACATGGATGGAAACACTTTCATCCATAGCATCAATAAGAATGCAGTGTCTTGGTTATATTTGGCTGGTGCCTCTTTTGCGGTTTGCTTCCTCGAGGGTTATTGTTGGACAAGAACAAGCGAAAGACAAGCGGCGAGAATGAGATGCAGGTATCTGAAAGCAGTACTCAGACAAGATGTAGAGTACTTCGATTTGCATGTCACGAGCACCTCAGAGATCATCACTAGCGTCTCCAGCGACAGCCTCGTAATTCAAGATGTTCTTAGTGAAAAGGTTCCGAATTTCTTGATGAACATGTCATTGTTCGTCGGGAGCTACATAGCGGCGTTTGCAATGTTGTGGAGGCTGGCCATTGTGGGGTTTCCTTTCGTCGTTCTTCTCGTGATCCCGGGTTTAATTTACGGCAAGACCTTGATTGGGTTGTCTAGTAAACTCAGAGAAGAGTACAACCAAGCTGGGACAGTGGCGGAACAAACAATTTCGTCCATCAGAACCGTTTTTTCATTTGTGGGGGAAAGCAAGACCATGAACGCTTTCTCAAACGCGCTTCAAGGAACGGTTAAGTTGGGTCTCAAACAAGGCTTGGCTAAGGGATTAGCCGTTGGAAGCAACGGCGTCGTTTTCGGCATTTGGTCCTTCATGTGCTACTACGGCAGCAGGCTCGTCATTTATCATGGCGTCAAAGGAGGGACAGTTTTTGCTGTCGGAGCAGCAATCGCCGTTGGTGGATTGGCATTAGGGGCGGGGTTATCCAACGTGAGGTACTTTTCGGAGGCGGGTGCGGCAGCGGAGCGTATAAAGGAAGTGATAAAGAGGGTTCCCAAGATAGATTCTGACAACAAGGAAGGGGAAATCCTGGAAAACATTTACGGGGAAGTGGAATTTGACCGAGTGGAATTCGCATACCCGTCGAGACCCGAAAGCGCGATTCTGAAGGGACTGAACCTGAGGGTGCCAGCAGGGAAGAGAGTGGCGTTGGTGGGAGAGAGTGGGTCAGGAAAATCTACGGTGATAGCTTTATTACAGAGATTTTATGACCCTTGTGGGGGAGAGGTGCGTGTGGATGGGGTGGGGATCCAGAAGCTGCAGCTGAAGTGGCTGAGGTCGTGTATGGGGCTGGTTAGCCAGGAACCTGCTCTGTTCGCGACCAGCATTAAAGACAACATACTTTTCGGCAAAGAGGATGCCACCCAGGACCAGGTGGTTGAGGCTGCAAAAGCTGCCCATGCTCATAATTTCATTTCGCTTCTGCCTCACGGTTACCATACACAGGTGGGAGAGAGGGGGATTCAGATGTCAGGGGGACAAAAACAGAGGATAGCAATTGCGAGGGCAATAATTAAGAAACCACGAATTCTCCTTCTGGACGAAGCAACAAGCGCGCTGGACTCAGAGTCAGAGAGACTCGTCCAAGAAGCGTTGGACAATGCAGCAGTGGGTTGCACCACCATCATCATAGCGCACCGCTTGTCCACCATCCAAAACGCGGACCTCATTGCCGTCGTCGGAGGCGGAAAAATCATCGAGATGGGCTCGCACGACGAGCTCATCAAAAACGACACCGGCGCTTACGCCTCCGCGTTTCGCCTCCAGCAACAAATGGGCAAAGACAAGGTAGAGGAAAGCACGGAAAAAACCGTTATTCCAGGGACTGTTTTATCCACAACCGAAACCCAAGACATGGGACTTACTTCTGTAGGCCCCACAATATCCGGTGGTTGTGATGATAACATGGCGACAGCGCCATCATTTTGGAGACTGATGGCGCTGAGCTACCCCGAGTGGAAGCATGGCGTTTTTGGGTGTCTGAATGCCATGGTGTTCGGTGCCGTTCAGCCGGTGTACGCATTTACGATGGGTTCCACCATACTTTTGTATTTTAACTCTGATCATGAGGAGATAATGAGGAGGACGAGGTTCTACTCGTTTACCTTTCTGGGCCTCTTTGTGGTGTCTTTGCTTTCGAATATTGGGCAGCATTATTGCTTCGGTTACATGGGGGAATACTTGACCAAACGGGTCAGAGAGACCGTGCTTGCCAAAATCCTCACTTTCGAAGTTGGGTGGTTTGATTTGGATCAGAACTCCACTGCCTCCATCTGTTCCAGACTTGCCAAAGATGCTAGTGTGGTGAGGTCTCTAGTGGGAGATAGAATGGCATTGCTAGTACAAACATTTTCAGCGGTAATAACAGCCTATACGATGGGTCTTATCATTTCTTGGAGGCTTTCCATCGTTATGATAGCTGTACAACCCATCATCATAGCATGCTTTTACACAAGGCGTGTGCTTCTCAAGAGCATGTCCAACAAGTCCATGAAGGCACAACAACAAAGCAGTAACATAGCTTCCGAAGCAGTTTCCAACCTTAGAACTGTCACAGCCTTTTCTTCTCAAGATAGGATTCTCAAAATGCTTGAAGAGGCTCAACAACGACCAAGTCTAGAGAACATAAGACAATCTTGGTTTGCTGGAATTGGGCTTGGATGCTCCCAGGGCCTTGCGTCTTGCATTTGGGCCTTAGATTTTTGGTATGGTGGCAAGCTTATTTCATATGGGTACATAACAACAAAAACGTTTTTTGAGAGCTTCATGGTTTTGGTGAGCACGGGAAGGATCATTGCTGATGCTGGAAGCATGACCACGGATCTTGCTAGAGGTGCTGATGTTGTAGGTGATATTTTTGGGATCATTGATCGGTGTACGAAAATTGAGCCTGATGACCCAAATGGGTACATACCGGAGAGGTTAATTGGTGAAATAGAGTTTCATGAAGTGCATTTCGCGTACCCTGCTAGGCCTAATGTGGCCATCTTTGAAAATTTCTCCATGAAAATAGAGGCGGGAAAATCTACGGCAATGGTGGGACAAAGTGGGTCCGGGAAATCGACGATCATTGGTCTAATAGAGAGGTTTTATGATCCACTTAAAGGGATGGTGACAATAGATGGCATGGACATAAAATCGTATAACCTAAAGTCACTAAGGAAGCACATAGCACTAGTGAGCCAAGAGCCAACGTTGTTCGGTGGGACCATAAGGGAGAACATTGCATACGGAAGATGTGAGAGTGAGAGGGTTGATGAGAGCGAGATCATAGAGGCGGCACGAGCGGCGAACGCGCACGATTTCATAGCTAGCTTGAAGGAAGGGTATGAGACATGGTGTGGGGATAAAGGGGTGCAACTTTCAGGGGGTCAAAAGCAAAGGATAGCAATAGCGAGGGCAATACTGAAAAACCCTAAGGTGTTGTTGTTGGACGAGGCCACAAGCGCATTAGATGGTCCATCAGAGAAGGTGGTGCAAGATACGTTGATGAGGGTGATGAGAGGGAGGACCGGCGTAGTGGTGGCACACAGGTTGAGCACCATACACAATTGTGATGTTATTGGTGTGTTGGAAAAGGGGAGGGTGGTGGAGATTGGAACCCACTCGTCCTTGTTGGCCAAAGGGTCATGTGGAGCTTATTACTCCTTGGTCAGTCTTCAGACGAGACATGCAACAACACCAAATAACACTAGTTGTACTAAAGCTGGTAGTACCCACTCTATCAATTGA 3780 0.4802 MGRDQKSVVAMVGQERKTNKKNGSLGFRSIFMHADGKDLFLMVLGTIGAVGEGLTTPLVLYISSRMMNNIGSSSNMDGNTFIHSINKNAVSWLYLAGASFAVCFLEGYCWTRTSERQAARMRCRYLKAVLRQDVEYFDLHVTSTSEIITSVSSDSLVIQDVLSEKVPNFLMNMSLFVGSYIAAFAMLWRLAIVGFPFVVLLVIPGLIYGKTLIGLSSKLREEYNQAGTVAEQTISSIRTVFSFVGESKTMNAFSNALQGTVKLGLKQGLAKGLAVGSNGVVFGIWSFMCYYGSRLVIYHGVKGGTVFAVGAAIAVGGLALGAGLSNVRYFSEAGAAAERIKEVIKRVPKIDSDNKEGEILENIYGEVEFDRVEFAYPSRPESAILKGLNLRVPAGKRVALVGESGSGKSTVIALLQRFYDPCGGEVRVDGVGIQKLQLKWLRSCMGLVSQEPALFATSIKDNILFGKEDATQDQVVEAAKAAHAHNFISLLPHGYHTQVGERGIQMSGGQKQRIAIARAIIKKPRILLLDEATSALDSESERLVQEALDNAAVGCTTIIIAHRLSTIQNADLIAVVGGGKIIEMGSHDELIKNDTGAYASAFRLQQQMGKDKVEESTEKTVIPGTVLSTTETQDMGLTSVGPTISGGCDDNMATAPSFWRLMALSYPEWKHGVFGCLNAMVFGAVQPVYAFTMGSTILLYFNSDHEEIMRRTRFYSFTFLGLFVVSLLSNIGQHYCFGYMGEYLTKRVRETVLAKILTFEVGWFDLDQNSTASICSRLAKDASVVRSLVGDRMALLVQTFSAVITAYTMGLIISWRLSIVMIAVQPIIIACFYTRRVLLKSMSNKSMKAQQQSSNIASEAVSNLRTVTAFSSQDRILKMLEEAQQRPSLENIRQSWFAGIGLGCSQGLASCIWALDFWYGGKLISYGYITTKTFFESFMVLVSTGRIIADAGSMTTDLARGADVVGDIFGIIDRCTKIEPDDPNGYIPERLIGEIEFHEVHFAYPARPNVAIFENFSMKIEAGKSTAMVGQSGSGKSTIIGLIERFYDPLKGMVTIDGMDIKSYNLKSLRKHIALVSQEPTLFGGTIRENIAYGRCESERVDESEIIEAARAANAHDFIASLKEGYETWCGDKGVQLSGGQKQRIAIARAILKNPKVLLLDEATSALDGPSEKVVQDTLMRVMRGRTGVVVAHRLSTIHNCDVIGVLEKGRVVEIGTHSSLLAKGSCGAYYSLVSLQTRHATTPNNTSCTKAGSTHSIN 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03159 1259 Gene3D - 986 1247 IPR027417 -
Gma08g03159 1259 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 19 1245 - -
Gma08g03159 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 984 1237 IPR027417 -
Gma08g03159 1259 SUPERFAMILY ABC transporter transmembrane region 36 351 IPR036640 GO:0005524|GO:0016021
Gma08g03159 1259 SMART AAA_5 1022 1219 IPR003593 -
Gma08g03159 1259 SMART AAA_5 394 588 IPR003593 -
Gma08g03159 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 367 603 IPR003439 GO:0005524
Gma08g03159 1259 Pfam ABC transporter 385 534 IPR003439 GO:0005524
Gma08g03159 1259 Pfam ABC transporter 1014 1165 IPR003439 GO:0005524
Gma08g03159 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 995 1234 IPR003439 GO:0005524
Gma08g03159 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 605 IPR027417 -
Gma08g03159 1259 Pfam ABC transporter transmembrane region 675 943 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g03159 1259 Pfam ABC transporter transmembrane region 42 310 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g03159 1259 ProSitePatterns ABC transporters family signature. 506 520 IPR017871 GO:0005524
Gma08g03159 1259 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 19 1245 IPR039421 -
Gma08g03159 1259 CDD ABC_6TM_Pgp_ABCB1_D2_like 662 978 - -
Gma08g03159 1259 CDD ABC_MTABC3_MDL1_MDL2 367 605 - -
Gma08g03159 1259 CDD ABC_6TM_Pgp_ABCB1_D1_like 42 340 - -
Gma08g03159 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 679 960 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g03159 1259 Gene3D ABC transporter type 1, transmembrane domain 30 961 IPR036640 GO:0005524|GO:0016021
Gma08g03159 1259 SUPERFAMILY ABC transporter transmembrane region 660 980 IPR036640 GO:0005524|GO:0016021
Gma08g03159 1259 CDD ABC_MTABC3_MDL1_MDL2 995 1237 - -
Gma08g03159 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 43 332 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g03159 1259 Gene3D - 357 606 IPR027417 -
Gma08g03159 1259 ProSitePatterns ABC transporters family signature. 1137 1151 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03159 Gma-Chr8 48395451 48402249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03159 11 1237 Calmodulin-binding Proteins AT2G36910 43.073 0.0 1022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03159 K05658 - gmx:100809399 2405.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01403 18 31369954 31377984 Gma08g03159 08 48395451 48402249 GST