Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03150 ATGCATTTCAATCGCCTCTGCATAGTTTTACCACCAAATTCTGGTGAAATGGTAGTGCCACTTGAAAAGGGTGTCCTACAAGAAGAACCCTTTCAAACACCAAAGAAGCAACAAGTTGAGGCCAAGAAGCCTCATAGGGCTTGTGGTGGACAAGTTCTTGATTTGCTTCGTGATTCTTTTACCAAGTTATATGATTCAAGGTGGTGGAGAATTTGCCAACATGGAGAACACAAAGAGAAGAACAACTCTGGTGTGTTTTTTCATGACATGGATGGTGTGCAAGTTTCTGTCAACATTGGCAGGGACAACCCCAGAATTTTCAGCTATGCTGAGTTGTTCATAGGGTCCAATGGTTTCAGTGAAGACCAAGTTCTAGGGAGTGGAGGGTTTGGAAGAGTATACAAGGCTGTTTTGCCAAGTGATGGAACTGAGGTTGCTGTGAAGTGCTGTTTAGCAGAGAAAGGGAAGCAGTTTGAGAAGAGTTTTGCTGCTGAGTTAACAGCTGTGGCAGATCTTCGCCACAAGAATCTTGTGAGGCTGAGGGGTTGGTGTGTGAATGAGGATCAGTTGCATCTTGTTTATGACTACATGCCTAACCGAAGCCTCGACCGCGTACTATTTCGAAGGCATGAGAATTCGAAGGCTGAGCCTCTTCAATGGGGACAAAGAGGGAAGATTTTGAAAGGTTTGGCAGCAGCATTGTACTATCTCCATGAGCAGCTAGAGACTCAAATCATTCATAGGGATGTTAAGACCAGCAATGTGATGCTTGATTCGCATTACAATGCTCGGTTGGGCGATTTTGGCATGGCAAGGTGGCTAGAACATGAGCTTGAGTATGAGTACAAGTATAACAATAGGAAAACAATCGCAACCAAAAGTGGCCACTTCAGGTTGGGAGAAACATCAAGAATTGGTGGCACAATTGGGTATCTTCCACCTGAAAGCTTGCAGAAACCAAGCAATGCTACTTCCAAATCTGATGTCTTTAGCTTTGGGATTGTTGTGCTAGAGGTGGTGTCTGGAAGGAGAGCAATTGACCTAACACACCCTGATGAACAAATCATTTTGCTTGATTGGATTAGAAGGCTTTCTGATGAAGGGAAGCTTCTGGAAGCGGCTGATTCTCGGTTACTGGATGGATCATACAAGCTTTCAGAGATGCAGCATTTCATTCACATAGGCCTCCTATGCACACTCCATGACCCTCAATTGAGGCCAAGCATGAAATGGGTAGTGGAAGCACTTTCTGACATTTCTTTCAAATTACCATCACTCCCTTCTTTCCTCTCCCACCCTTTATACATCTCTCTGTCTTCTCCTTCTAATACTAATAATAGTCCTAGCAGCACAAGTGTCACTAGCTCCTCCACCACAGATAATGCTAGCAGCATAATCACCAACCATACTTCATCAAACTATGTCACAGCTGCAGGTGAAACTGTGTATGTCACTGCTGAGTACAAAAACAGTGAAATCATCTCTTCTAAGAGCATGAGCCACCACCAGCAACCATTTCCTGTGGTTGAAACTCCAAGGGAAATATCATTCAAGGAGATTGTTTCTGCTACAGATAACTTTTCTGATTCGAGAAGGGTGGCTGAGCTAGACTTTGGAACTGCTTACCATGGCATCCTTGATGACAAGTGCCATGTTTTGGTGAAACGCCTTGGGCTGAAAACGTGTCCTGCATTGCGTGATAGATTCTCCAACGAACTTCGGAATCTTGGAAGGCTTCGCCATAGGAATTTGGTTCAGCTTCGAGGATGGTGCACCGAGCAAGGAGAGATGCTTGTCTTATATGATTACTCAGCAAGTAGAATTCTCAGCCAACGGCTTCAGCATCATAGCAATGGAAGTAGAAGGGGGAGTTCTGTCCTCCAATGGCACCACAGGTATAACATAGTGAAAGCACTGGCCTCTGCAGTTCTCTATCTACATGAGGAATGGGATGAACAAGTGATCCACAGAAACATTACCTCTTCAGCTGTCATTCTTGAACCAGATATGAATCCAAGACTCACCTCTTTTGCTCTAGCCGAATTTTTGTCAAGGAATGAGAATGGTCATCATGTAGTCATTGATACTAAAAAGTCGGTTCGtgggatatttggctacatggcaccggaatatgttgaatcaggtgaagcaaccactgaggctgatgtttatagttttggtgtggtggtgcttgaagttgttagcggacagatggcagtggaTTTCAGGCAGCCAGAGGTGCTTTTGGTTAAGAAGGTTCATGAATTTGAGATGAGAAAAAGGCCATTGAAGGAATTAGCTGATATAAGACTCAATGGAGAGTACAATGACCAAGAATTGATGAGATTGGTAAGGTTAGGAATAGCTTGCACCAGATGTAACCCGCAGTTAAGACCAAGCATGAGACAAATTGTAAGCATCCTTGATGGCAATGACAAATTACTTATCCAGAATAACAAGGAGAGCAGAGAAGAATGGAGGGAAAGAAATGATTGTTCTTTGTCAATGATTAAGAGAATTCAAGCTCTAGGAATACAGTAA 2541 0.4136 MHFNRLCIVLPPNSGEMVVPLEKGVLQEEPFQTPKKQQVEAKKPHRACGGQVLDLLRDSFTKLYDSRWWRICQHGEHKEKNNSGVFFHDMDGVQVSVNIGRDNPRIFSYAELFIGSNGFSEDQVLGSGGFGRVYKAVLPSDGTEVAVKCCLAEKGKQFEKSFAAELTAVADLRHKNLVRLRGWCVNEDQLHLVYDYMPNRSLDRVLFRRHENSKAEPLQWGQRGKILKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSHYNARLGDFGMARWLEHELEYEYKYNNRKTIATKSGHFRLGETSRIGGTIGYLPPESLQKPSNATSKSDVFSFGIVVLEVVSGRRAIDLTHPDEQIILLDWIRRLSDEGKLLEAADSRLLDGSYKLSEMQHFIHIGLLCTLHDPQLRPSMKWVVEALSDISFKLPSLPSFLSHPLYISLSSPSNTNNSPSSTSVTSSSTTDNASSIITNHTSSNYVTAAGETVYVTAEYKNSEIISSKSMSHHQQPFPVVETPREISFKEIVSATDNFSDSRRVAELDFGTAYHGILDDKCHVLVKRLGLKTCPALRDRFSNELRNLGRLRHRNLVQLRGWCTEQGEMLVLYDYSASRILSQRLQHHSNGSRRGSSVLQWHHRYNIVKALASAVLYLHEEWDEQVIHRNITSSAVILEPDMNPRLTSFALAEFLSRNENGHHVVIDTKKSVRGIFGYMAPEYVESGEATTEADVYSFGVVVLEVVSGQMAVDFRQPEVLLVKKVHEFEMRKRPLKELADIRLNGEYNDQELMRLVRLGIACTRCNPQLRPSMRQIVSILDGNDKLLIQNNKESREEWRERNDCSLSMIKRIQALGIQ 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03150 846 MobiDBLite consensus disorder prediction 441 461 - -
Gma08g03150 846 SUPERFAMILY Protein kinase-like (PK-like) 103 457 IPR011009 -
Gma08g03150 846 Gene3D Transferase(Phosphotransferase) domain 1 609 834 - -
Gma08g03150 846 PANTHER - 1 845 - -
Gma08g03150 846 Pfam Protein kinase domain 120 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03150 846 Pfam Protein tyrosine and serine/threonine kinase 533 808 IPR001245 GO:0004672|GO:0006468
Gma08g03150 846 Gene3D Transferase(Phosphotransferase) domain 1 197 422 - -
Gma08g03150 846 Gene3D Phosphorylase Kinase; domain 1 91 196 - -
Gma08g03150 846 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 1 845 - -
Gma08g03150 846 ProSiteProfiles Protein kinase domain profile. 527 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03150 846 Gene3D Phosphorylase Kinase; domain 1 485 603 - -
Gma08g03150 846 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Gma08g03150 846 SMART serkin_6 119 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03150 846 SUPERFAMILY Protein kinase-like (PK-like) 501 808 IPR011009 -
Gma08g03150 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Gma08g03150 846 CDD STKc_IRAK 538 810 - -
Gma08g03150 846 ProSiteProfiles Protein kinase domain profile. 119 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03150 Gma-Chr8 48232917 48235697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03150 512 810 Receptor kinase-like Gene Family AT3G59740 32.673 1.52e-43 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma08g03150 Pkinase 9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03150 - - gmx:100796108 1637.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00194 03 2400081 2403057 Gma08g03150 08 48232917 48235697 PCT