Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03133 ATGAGCGATTCTGCATACAGAGTCCAAACCACACCGCGCCTTGCTCAATGGAGAATCGAAAACTTGGCTTCTTGCACTTACCGCAAATCAGATCCTTTCAAGATCGGAAACTGGAATTGGCATTTGTCGGTGGAGAAAAACAGGGTTTTGTTTGTTAAATTGTTCCCAGAAATATCCAATCTTACGAGAGACAACCCCCCAATTGCATCTTTCATCGTTCGGGTCGTTAGTTCTGTTGGAGGTCGCCAGGCCATCACACATCCAGAAATAAAGGACAAAGTGTTAAAGAACAACGAGGATTTTGTTTGGGCAATTGAGGTTCCACTAACTGGGAAATTCATTATTGACGTAGAGTTTCTTGATTTGAAGACTGCATCCCCAAACGGTGGAGAACCTTGTTCCATTTGGGCAGAAGGATTTACTCAGCAAAGATCAAATGCAAAAGCCATAGAGTCTCTTGGTAGAATGCTAACAGAAGGCATTCACACAGACATCACCATCAATGCTTCTGATGGAAGTATAGGAGCTCATAGAGCTGTTCTTGCTGCCAGATCACCTGTCTTCCGCAGCATGTTCTCACATAATCTTCAGGAGAAAGAGTTATCAACCATAAACATCTCAGACATGTCACTTGAATCATGCCAGGCTTTTCTCTATTATCTTTATGGGATAATCAAACATGAAGAGTTTCTGACTCATAGGCTGGCCCTTCTGCAGGCGGCTGACAAGTATGACATATCTGACTTGAGAGATGTATGCCACGAAAGTCTTCTAGAAGATATTGACACAAAGAATGTACTTGAGAGGCTCCAAAATGCATCTCTATATCAGTTGATGAAACTGAAGATGAGTTGCATCCGATATCTTGTGAAGTTTGGTAAAATATATGAAATTCGCGATGATTTCAATACCTTCCTGCGAAATGCAGATAGGGATCTGATTTCTGAAGTCTTCCATGAAGTTCTTGATGCTTGGAAAGGATTCTGA 987 0.4174 MSDSAYRVQTTPRLAQWRIENLASCTYRKSDPFKIGNWNWHLSVEKNRVLFVKLFPEISNLTRDNPPIASFIVRVVSSVGGRQAITHPEIKDKVLKNNEDFVWAIEVPLTGKFIIDVEFLDLKTASPNGGEPCSIWAEGFTQQRSNAKAIESLGRMLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHNLQEKELSTINISDMSLESCQAFLYYLYGIIKHEEFLTHRLALLQAADKYDISDLRDVCHESLLEDIDTKNVLERLQNASLYQLMKLKMSCIRYLVKFGKIYEIRDDFNTFLRNADRDLISEVFHEVLDAWKGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03133 328 Pfam BTB/POZ domain 156 259 IPR000210 GO:0005515
Gma08g03133 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Gma08g03133 328 PANTHER OS08G0495500 PROTEIN-RELATED 1 328 IPR044714 -
Gma08g03133 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Gma08g03133 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Gma08g03133 328 Gene3D Potassium Channel Kv1.1; Chain A 140 291 IPR011333 -
Gma08g03133 328 SUPERFAMILY POZ domain 149 259 IPR011333 -
Gma08g03133 328 PANTHER OS08G0495500 PROTEIN 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03133 Gma-Chr8 48054503 48056991 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gma08g03133 BTB 2.1e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03133 K10523 - gmx:100777871 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03133 08 48054503 48056991 Gma08g03133 08 48054503 48056991 ECH
Gma18g00678 18 6900793 6903649 Gma08g03133 08 48054503 48056991 GST
Gma08g03133 08 48054503 48056991 Gma14g01909 14 49736080 49752137 PCT
Gma08g03133 08 48054503 48056991 Gma02g02131 02 47135008 47138897 PCT