Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03131 ATGAAGATCACTGTCATGACTGCTGATGAACAAATCATCACGTTGGATGTGGATCCCCACGAATCTGTGGAAAACGTCAAAGCATTGCTCGAGGTTGAGACAAGTGTGGCTCTTCAACAACAGCAGCTTCTGTTTAATGGGAAGGAAGTTAGGAATTCTGAGAAGTTGAGCGCTCTTGGTGTTAAGGATGATGATTTGCTGATGATGGTATCTGGTGCTGGCGCTGGTGCTGCTGCTTCTAGTGGATCTACCAATGATTTGAGCTTAAATACTGATGGATCTGCTGTCAACCCTGGTGCTTTCCAGCAGCACATTAGACGTGATTCTAATTTGATGGGTCAGCTCTTTCAGAGTGATCCAGAGTTGGCACAAGCTATTTTAGGGAATGATTTGAACAAATTGCAGGAAGTTTTACGATTGCGTCATCACCAAAGAGATGAATTAAAGCGTCAGAAGGAAGAAGAGCTTGCTCTTCTTTATGCTGATCCTTTTGATGTTGAAGCACAAAAGAAGATTGAAGCTGCCATCCGCCAGAAAGGGATTGATGAAAATTGGGCTGCTGCATTAGAACATAATCCTGAAGCTTTTGCTAGAGTGGTCATGTTGTATGTTGATATGGAGGTTAATGGTGTCCCATTGAAGGCATTTGTTGATAGTGGAGCTCAGTCTACCATTATATCAAAAAGCTGTGCTGAGCGTCTTGGATTGTTGAGACTTTTAGATCAGCGTTACAGAGGAATTGCTCATGGAGTTGGCCAGTCAGAAATATTGGGTCGTATACATGTAGCTCCAATCAAGattgggagtatattttacccttgctcattcttggtgctggattctcccaatatggagtttctcttcggactggatatgctccgaaagcaccagTGTATAATTGATTTGAAAGAAAATGTTTTGCGAGTTGGTGGAGGAGAAGTTTCTGTGCCATTTTTGCAAGAGAAAGACATACCATCTCGGTTTCTAGACGAGGAAAAGTATGCTAAGGAAGCTTCAGGCTCTGGTGGTCAAATTTCATCAGGCAGCAATAATCCATCAACAGGAGGCCACTCTTCTGGTGGAGCTTCTGGTGATAAGGCTAAGGATTCTGAGTTTGAAGCCAAAGTTGCAAAGCTTGTTGAATTGGGATTTGAAAGAAATGCAGTTATACAAGCTCTTCAATTATTCAATGGAAATGAAGAACAGGCAGCTGGGTTTCTTTTTGGGGGCTAG 1233 0.3925 MKITVMTADEQIITLDVDPHESVENVKALLEVETSVALQQQQLLFNGKEVRNSEKLSALGVKDDDLLMMVSGAGAGAAASSGSTNDLSLNTDGSAVNPGAFQQHIRRDSNLMGQLFQSDPELAQAILGNDLNKLQEVLRLRHHQRDELKRQKEEELALLYADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERLGLLRLLDQRYRGIAHGVGQSEILGRIHVAPIKIGSIFYPCSFLVLDSPNMEFLFGLDMLRKHQCIIDLKENVLRVGGGEVSVPFLQEKDIPSRFLDEEKYAKEASGSGGQISSGSNNPSTGGHSSGGASGDKAKDSEFEAKVAKLVELGFERNAVIQALQLFNGNEEQAAGFLFGG 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03131 410 MobiDBLite consensus disorder prediction 340 360 - -
Gma08g03131 410 Pfam Aspartyl protease 179 301 IPR019103 GO:0004190|GO:0006508
Gma08g03131 410 Gene3D Acid Proteases 180 326 IPR021109 -
Gma08g03131 410 MobiDBLite consensus disorder prediction 338 367 - -
Gma08g03131 410 Coils Coil 134 154 - -
Gma08g03131 410 ProSiteProfiles Ubiquitin domain profile. 1 76 IPR000626 GO:0005515
Gma08g03131 410 SUPERFAMILY UBA-like 361 410 IPR009060 GO:0005515
Gma08g03131 410 Pfam Ubiquitin family 3 70 IPR000626 GO:0005515
Gma08g03131 410 SMART uba_6 372 409 IPR015940 -
Gma08g03131 410 SUPERFAMILY Acid proteases 187 302 IPR021109 -
Gma08g03131 410 CDD UBA_scDdi1_like 373 408 - -
Gma08g03131 410 Pfam UBA/TS-N domain 373 406 IPR015940 -
Gma08g03131 410 Gene3D - 1 85 - -
Gma08g03131 410 CDD Ubl_Ddi1_like 1 70 IPR033882 -
Gma08g03131 410 SMART ubq_7 1 72 IPR000626 GO:0005515
Gma08g03131 410 CDD RP_DDI 186 309 IPR019103 GO:0004190|GO:0006508
Gma08g03131 410 PANTHER ASPARTYL PROTEASE DDI-RELATED 1 408 - -
Gma08g03131 410 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 367 410 IPR015940 -
Gma08g03131 410 Gene3D - 343 410 - -
Gma08g03131 410 PANTHER AT13091P 1 408 - -
Gma08g03131 410 SUPERFAMILY Ubiquitin-like 1 84 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03131 Gma-Chr8 48014807 48031734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03131 1 70 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 30.000 3.26e-06 44.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03131 08 48014807 48031734 Gma08g03131 08 48014807 48031734 ECH
Gma18g00675 18 6865684 6873713 Gma08g03131 08 48014807 48031734 GST