Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03127 ATGGCGCCAACGCTGAACCTCTCCGCCGTCGGAACTCCTCTCCGTTTCTCCTCCTCCGTCGACCGCTCCGCCAGCTTTCCCCAGCGGAACTCCGTCCGCGCCGTCGCGGAGGAGGCGGTGGAGACACGGCGGCCGGCAGCCAGCCTCTACGATGTGTTGCGAGTCGAGCGAGACGCATCTCCGACGGAGATCAAGTCGGCGTACCGGAGCCTCGCGAAGCTCTTACATCCCGACGCGGCGGTGCGGCGTTCGCCAGAGACAGACGGAGGCGGCGGTTACGTCGACGGAGACTTCATTCAGCTCCGAAACGCGTACGAGACGCTGTCGGATCCGTCGGCGAAGGCGATATACGATATGACGCTGGCGGCGCCGCACGGCGGAAGACACCGCCGGTTTTCTACTCCACTTATTCGGAACCACTCGTCGGCGTTTTACACAACGCGAAGGTGGGAAACAGACCAATGCTGGTAG 471 0.6369 MAPTLNLSAVGTPLRFSSSVDRSASFPQRNSVRAVAEEAVETRRPAASLYDVLRVERDASPTEIKSAYRSLAKLLHPDAAVRRSPETDGGGGYVDGDFIQLRNAYETLSDPSAKAIYDMTLAAPHGGRHRRFSTPLIRNHSSAFYTTRRWETDQCW 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03127 156 SMART dnaj_3 47 113 IPR001623 -
Gma08g03127 156 PRINTS DnaJ domain signature 50 68 IPR001623 -
Gma08g03127 156 PRINTS DnaJ domain signature 68 83 IPR001623 -
Gma08g03127 156 PRINTS DnaJ domain signature 93 113 IPR001623 -
Gma08g03127 156 ProSiteProfiles dnaJ domain profile. 48 121 IPR001623 -
Gma08g03127 156 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 156 - -
Gma08g03127 156 CDD DnaJ 50 110 IPR001623 -
Gma08g03127 156 Gene3D DnaJ domain 33 134 IPR036869 -
Gma08g03127 156 SUPERFAMILY Chaperone J-domain 46 127 IPR036869 -
Gma08g03127 156 Pfam DnaJ domain 49 118 IPR001623 -
Gma08g03127 156 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Gma08g03127 156 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03127 Gma-Chr8 47980911 47981837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03127 39 118 C2H2 Transcription Factor Family AT1G74250 36.250 8.43e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03127 - - gmx:100798752 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03127 08 47980911 47981837 Gma08g03127 08 47980911 47981837 ECH
Gma18g00673 18 6844396 6845273 Gma08g03127 08 47980911 47981837 GST
Gma08g03127 08 47980911 47981837 Gma14g00102 14 846092 848706 PCT
Gma14g00102 14 846092 848706 Gma08g03127 08 47980911 47981837 PCT