Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03126 ATGGAGACTCCAATTGAAGTGAAACCTACTCGTGTTGCATCCGGATTCTTAGATGATTTGTCTGAGACTTGCAAGATGGGTAGTCCGAATGGAAGAGCAATGTATAGGACAGACGATGAAGTTCCTTTTGACTCCGAAATAAATTTTCACCCGTCAGAATCGAGTCTGATGGATGTACATGGATCACATTCTGGAGAATCTCGGACTGTCCATCATGAAACGTTGGCGGGTATGATTTACAGGAGCATACAAGTTGTAGTCTTTTCTAACAAACTCAACTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTACAGAAGTTGACTGGTCATCTTggttgggtctttggtctgagttTGTTGGGGATAATGCCTCTGGCAGAGCGGTTAGGTTATGCTACCGATCATATGCTTGTGGTGTGGTTTATTTCTAATTTCATAATATTGTATCTTACAGTTGGGGGTCTTTTAAATGCTACATTTGGAAATGCAACAGAACTGATCATCTCAATATATGCACTGAAAAGTGGAATGACACGCGTTGTCCAGCTCTCTTTGCTGGGTTCAATTTTGTCCAATATGTTACTGGTGCTTGGGTGTGCATTCTTATGTGGCGGGATTGTTAATCACGAGAAGGAGCAAGTGTTTAACAAGGCAGCTGCTTCCGTGAACTCAGGATTATTGCTAATGGCAGTCATGGGCATACTTTTTCCTGCTGTTCTACACTACACTCACACTGAGGTCCATGTTGGGAAGTCAGAGTTGTCACTTTCAAGATTCAGCAGCTGCATTATGCTTGTGGCTTATGTTGCATACCTATTTTTTCAGTTAAAAAGTCAAAGAAATCTCTACGTCTCTGTGAACGAGGATGAGGGTCAGAATGGAAACAACTCAAATGATGATGAATCTTCAGATATTTCTAAATGGGAAACAATAATCTGGCTTTCGGTTATGACTGCTTGGATATCAATCCTGTCAGAATATTTGGTTGGCGCTATAGAGGGAGCATCTACGGCATGGGAAATTCCAGTAGCATTTATTAGTGTCATATTGCTTCCACTAGTGGGGAATGCAGCTGAACATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGACATTTCCTTAGGAGTAGCAATTGGGTCATCCACACAGATATCTATGTTTATACCATTTTGTGTTGTTATTGGCTGGATAACAGGGCACCCTATGGACTTAAACTTTCAACTTTTTGAGACTGCAGTACTATTTCTTACTGTTATAGTTGTCGCCTTCATGTTACAGGAAGGAACTGCTAATTACTTCAAAGGACTAATGCTTATTCTTTGCTATCTGATAGTGGCAGCCAGTTTTTATGTACATGTAGATTCCTCTCAATAA 1383 0.3991 METPIEVKPTRVASGFLDDLSETCKMGSPNGRAMYRTDDEVPFDSEINFHPSESSLMDVHGSHSGESRTVHHETLAGMIYRSIQVVVFSNKLNLLMPFGPLAILVQKLTGHLGWVFGLSLLGIMPLAERLGYATDHMLVVWFISNFIILYLTVGGLLNATFGNATELIISIYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLCGGIVNHEKEQVFNKAAASVNSGLLLMAVMGILFPAVLHYTHTEVHVGKSELSLSRFSSCIMLVAYVAYLFFQLKSQRNLYVSVNEDEGQNGNNSNDDESSDISKWETIIWLSVMTAWISILSEYLVGAIEGASTAWEIPVAFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFIPFCVVIGWITGHPMDLNFQLFETAVLFLTVIVVAFMLQEGTANYFKGLMLILCYLIVAASFYVHVDSSQ 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03126 460 Pfam Sodium/calcium exchanger protein 112 277 IPR004837 GO:0016021|GO:0055085
Gma08g03126 460 Pfam Sodium/calcium exchanger protein 313 451 IPR004837 GO:0016021|GO:0055085
Gma08g03126 460 TIGRFAM caca2: calcium/proton exchanger 82 452 - -
Gma08g03126 460 Gene3D - 298 454 IPR044880 -
Gma08g03126 460 Gene3D - 148 288 IPR044880 -
Gma08g03126 460 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 29 459 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gma08g03126 460 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 29 459 - -
Gma08g03126 460 TIGRFAM cax: calcium/proton exchanger 96 453 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03126 Gma-Chr8 47963640 47968917 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03126 32 460 Antiporters AT1G55730 68.372 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03126 K07300 - gmx:100799276 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03126 08 47963640 47968917 Gma08g03126 08 47963640 47968917 ECH
Gma18g00672 18 6822587 6828802 Gma08g03126 08 47963640 47968917 GST