Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03125 ATGTCATTCTCTATTGTGATTCACAATATGGGTTCATGGGTAAATGAACCACAATTGTATTATAAGGGGGGCGAGGTGCATGTAATTCATGGATTGGATGTTAGTAAATGGTCATATTTTGAAGCTATGAGGGTACTAACAGAACTAGGCTATAAGGGAGATGGTGATATGAAAATGTGGTGGAAAGGGAAGGGAACTGATTTTGATAGTTTAAGAGATTTTGTGTTGGATCAAGATGCTATGGACTTGGCCAATTATGCTCTAACTCACAACTGTGAAGTTGAGATATATGTTCAACATGGGGTGGGTGTTCTAGTTGAAAATGACAGTATATGTAAGATGATAGTTAATGGGGAGCAATGCCATAAtggtagtttggagcaatgtggtaatgttcaagaatctggtaatttgaaccaacttggtaatgttaagcaatctggtaatgtggaccaatctTCTGGTGGCGAAGATTTGGAGAAGTCAAATTTCAATGCCAGTGCAGAAGAAAGGGACTTAGGCATGGAAGATGGGTTTGATCTTCCTGAGGTTGGACATGTTAAGGCCACATTGAATAAGAAGGTGGATAAAATGAAGAACAAAGTTGAGGGGGTCACAAGGGGATATGGTACACGACAGAGAAAGAATAAAGATATTGCAAGGAGGGATAATGATCATAAAGTAAATGTGCCTGATGATGCTGACTCATTGTATAAGATGGAAAGTTCTTACTATAGTGACGAGTTGGATAGTGATATTGGTCAGGATGATGACATTGAAAGTCATGCAACGAAACATGTCACGTTTAAGAAGGAGGATATGCGTAACTTCATTAAGCAGAGTTTACTACTCAGCGAATATTCAATACAGATTGGTTCTCATAATGAAAGGCCAATGCATAAGTCTGATGATGAAGTTTCTTTTGGCTCTGAAATAATAAATTTTAACCAGCCAGAATCTATTGATCTGCTGGAAATACATGGTTCACATTATGGAGAATCTCGGACTGTCCATCATGAAACGATGGCGGGTATGATTTACAGGAGCATAAGGGTTGTGCTTTTGTCTAGCAAACTCAACTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTGCAGATATTGACTGGTCATCATggttggatctttggtctaagttTGTTGGGAATAATGCCTATGGCAGAGCGGTTAGATTATTTTATTTCTAATTTTATTATATTGTATCTTGCAGTTGGGGTAGGGGGTATTTTTAATGCTTCATTTGGAAATGCAACGGAATTGATCATCTCACTATGTGCACTGAAAAGTGGAATGATACGGGCTGTCCAGCTATCTTTGCTGGGTTCAATTTTCTTCAATATGTTGCTGGTGCTTGGATGTGCATTCTTCAGAGGGGGGATTGTTTCTAATAAGAAGGAACAAGTGTTTAACAAGGAAATTGCTTCTGTAAACTCAGGATTATTACTGATGGCAGTTATGGGCATACTTCTTCCTGCTGCTCTACACTACACACAGGCTGAGGTCCATGTTGGGGAGTCAGAGTTGTCACTTTCAAGATTCAGCAGCTGCATAATGCTTGTGGCCTACGTTGCATGCCTATTTTTCCAGTTTAAAAGTCAAAGAAGTCTCTATGTCCCTGTGAACGAGGAAGGGGGTCACAATGGATACAATTCAAATGATGATGAATCTCCATATATTTCTAAATGGGAATCGATAATCTGGCTTTCGGTTTTTACTACTTGGACATCAATGTTGTCACAGTATTTGGTTGACACTCTAGAGGGAGCATCTACTGCATGGGGAATTCCAGTAGCATTTATTAGTGTCATATTGCTTCCACTAGTGGGGAATGTCAGTGATATAATATTTTCCATGGAAGATAAACTCGACATTTCCTTAGGAGTAGCAATTGGGTCATCCACACAGATATCTATGTTTGTGATTCCATTTTGTGTTGTTATTGGTTGGATGATGGGGCAACCTATGGACTTAAACTTTCACCTTTTTGAGACTGCAGCACTATTTCTCACTGTTATAGTCGTAGCCATCATGTTACAGGAAGGAACTGCCAATTACTTCAAAGGACTACTGCTTATTCTTTGCTATCTGATAGTGGCTGCCAGTTTTTATGTACATTTAGATTCCTCTCAATAA 2154 0.3714 MSFSIVIHNMGSWVNEPQLYYKGGEVHVIHGLDVSKWSYFEAMRVLTELGYKGDGDMKMWWKGKGTDFDSLRDFVLDQDAMDLANYALTHNCEVEIYVQHGVGVLVENDSICKMIVNGEQCHNGSLEQCGNVQESGNLNQLGNVKQSGNVDQSSGGEDLEKSNFNASAEERDLGMEDGFDLPEVGHVKATLNKKVDKMKNKVEGVTRGYGTRQRKNKDIARRDNDHKVNVPDDADSLYKMESSYYSDELDSDIGQDDDIESHATKHVTFKKEDMRNFIKQSLLLSEYSIQIGSHNERPMHKSDDEVSFGSEIINFNQPESIDLLEIHGSHYGESRTVHHETMAGMIYRSIRVVLLSSKLNLLMPFGPLAILVQILTGHHGWIFGLSLLGIMPMAERLDYFISNFIILYLAVGVGGIFNASFGNATELIISLCALKSGMIRAVQLSLLGSIFFNMLLVLGCAFFRGGIVSNKKEQVFNKEIASVNSGLLLMAVMGILLPAALHYTQAEVHVGESELSLSRFSSCIMLVAYVACLFFQFKSQRSLYVPVNEEGGHNGYNSNDDESPYISKWESIIWLSVFTTWTSMLSQYLVDTLEGASTAWGIPVAFISVILLPLVGNVSDIIFSMEDKLDISLGVAIGSSTQISMFVIPFCVVIGWMMGQPMDLNFHLFETAALFLTVIVVAIMLQEGTANYFKGLLLILCYLIVAASFYVHLDSSQ 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03125 717 TIGRFAM caca2: calcium/proton exchanger 350 709 - -
Gma08g03125 717 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 294 716 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gma08g03125 717 MobiDBLite consensus disorder prediction 140 161 - -
Gma08g03125 717 MobiDBLite consensus disorder prediction 206 232 - -
Gma08g03125 717 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 294 716 - -
Gma08g03125 717 TIGRFAM cax: calcium/proton exchanger 363 710 IPR004798 GO:0006816|GO:0015369
Gma08g03125 717 Pfam Sodium/calcium exchanger protein 381 537 IPR004837 GO:0016021|GO:0055085
Gma08g03125 717 Pfam Sodium/calcium exchanger protein 572 708 IPR004837 GO:0016021|GO:0055085
Gma08g03125 717 Gene3D - 410 547 IPR044880 -
Gma08g03125 717 Gene3D - 556 711 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03125 Gma-Chr8 47950378 47959947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03125 316 717 Antiporters AT1G55730 65.196 7.58e-180 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03125 K07300 - gmx:100799808 1404.42