Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03100 ATGTCAAGGAGCAGCACACAGGCATGTGCAGCTTGTAAGTACCAACGCAGGAAGTGCGGGTCCAACTGCATTCTGGCGCCTTATTTTCCTCATGATCGCCAAAAACAGTTCCTTAATGCCCATCGTTTATTCGGGGTTGGCAAGATCACCAACATGATTAAGCCCCTCGATCAGCACCACAGAGACTTAGCCATGAGCACCCTTATCTACGAATCCGACATGCGCGCCCGTGACCCCATTGGTGGTTGCTACAGCCTCGTCCTCCAATTGCAATCTCAGATCTTTTACGCCACCCAACAACTTCATCTTCTTCTTCAACACCTTGCTTATTTCAAATCACACCAACCTTCTTCTAATTCCTCTGACATAGTCAATAATGTCACTCCTCAGCCGCCTGACCCCCTTGAACAAACTCCACAGGAACAGCAGCAACAACAACAATGTTTTAACTACAATCTTTTGCAAGAAGATGATATCAATATGTGGGCCATTCAGAATTCTTTATCTCTTTTGTCACCCTTGTCCTTAGAGAATAACATCAATCAAGATCCTGTTGTTGATCATGGATCGCACTCTCTCTAA 582 0.4536 MSRSSTQACAACKYQRRKCGSNCILAPYFPHDRQKQFLNAHRLFGVGKITNMIKPLDQHHRDLAMSTLIYESDMRARDPIGGCYSLVLQLQSQIFYATQQLHLLLQHLAYFKSHQPSSNSSDIVNNVTPQPPDPLEQTPQEQQQQQQCFNYNLLQEDDINMWAIQNSLSLLSPLSLENNINQDPVVDHGSHSL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03100 193 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Gma08g03100 193 Pfam Lateral organ boundaries (LOB) domain 8 103 IPR004883 -
Gma08g03100 193 MobiDBLite consensus disorder prediction 119 144 - -
Gma08g03100 193 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 189 - -
Gma08g03100 193 PANTHER LOB DOMAIN PROTEIN 3 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03100 Gma-Chr8 47725989 47726570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03100 7 165 AS2 family AT3G13850 46.961 1.77e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma08g03100 LOB 8.8e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03100 - - gmx:102659782 344.739