Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma08g03098 | ATGTTTTGGGACATAACCCAAGAACAGCAAGAGGATCTCTGCACCCTAACCACTTTCGATTTTTTTCAAAACGCAACTGTCATCGTGTCGTTCACCGATAAGATGTCGTATTCAAGGAGATCAAGGTATTCTCGTTCTCCTTCTCCATACAAGCGATACAGTAGGTCTGTGTCCAGGTCTCTCTCAAGGACAAGCTCCAGAAGCCGTTCAAGGAGTTTATCAAGAGATGCAGAAAATCCAGGAAACAATTTGTATGTGACAGGATTGTCTCCTAGGATCACCAAGAGAGAACTGGAGAAACATTTTTCTGCTGAGGGAAAAGTGATAGATGTCCATCTGGTAGTTGATCCTTGGACAAGGGAATCCCGTGGGTTTGGCTTTGTGACAATGGAGACTCTTGAGGAGGCAGATCGATGTGTAAAGTATCTGAATCGCTCAGTACTTGAAGGGCGTGTCATCACGGTGGAGAAGGCTAAAAGACGACGTGGTCGAACCCCAACACCAGGGAAGTATCTAGGGCTGAGAACTATTCGTGCTCAACGGCGTTCTCCAAGTGACTCTCCTCGTCGCTCCCCTAGCTATTCTCCTTATAGAAGAAGCTATAGCCGGTCTCCCTATTCTTCAGACCGAAGTAGGAGTCGTTCTTACTCTCCTGACTATAGGAGGAGGAAGTCAAACTATCCATATCACTCTAGGCGAAGGTCATACTCTCCATACTACAGCCGGTACAGGTCTTATTCTCGATATGATCGACACAGGTCATATTCTCGCTCTTGCTCTCCTTATAGCAGGTCACCTGTCAGCATCCGCGACAGATCATACTCTCCTTATGACtcacgatatgactcaccggatgatcactcctacagaaggcaccattacagatctgtttcacgaggtgcctcgcctgatgatcgctattatagaaggcaccattacaggtctgtttctcgaagtgcctcACCCAGGCCAAGGAGAAGGTCAAGGAGGAGCTACTCTCGGAGTGCCACTCCTGTTTCAAAGAGGAGCAACTCGCGAAGTGTGTCCCCCAGGTCAAGGAAGAGTCATTCAAGAAGCTCCAAGAGGAGTGGCAAATATGAGAAACACTACTCAAGAAGCCCGAGTGTGAGTGCAAGTTCAAGATCAGTATCGAGGTCAAATACTCCAAGGTCTACCTCTCCTTCAACTTGA | 1191 | 0.4223 | MFWDITQEQQEDLCTLTTFDFFQNATVIVSFTDKMSYSRRSRYSRSPSPYKRYSRSVSRSLSRTSSRSRSRSLSRDAENPGNNLYVTGLSPRITKRELEKHFSAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEADRCVKYLNRSVLEGRVITVEKAKRRRGRTPTPGKYLGLRTIRAQRRSPSDSPRRSPSYSPYRRSYSRSPYSSDRSRSRSYSPDYRRRKSNYPYHSRRRSYSPYYSRYRSYSRYDRHRSYSRSCSPYSRSPVSIRDRSYSPYDSRYDSPDDHSYRRHHYRSVSRGASPDDRYYRRHHYRSVSRSASPRPRRRSRRSYSRSATPVSKRSNSRSVSPRSRKSHSRSSKRSGKYEKHYSRSPSVSASSRSVSRSNTPRSTSPST | 396 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma08g03098 | 396 | MobiDBLite | consensus disorder prediction | 370 | 396 | - | - | |
Gma08g03098 | 396 | Gene3D | - | 30 | 166 | IPR012677 | - | |
Gma08g03098 | 396 | MobiDBLite | consensus disorder prediction | 312 | 332 | - | - | |
Gma08g03098 | 396 | CDD | RRM_RBMX_like | 81 | 160 | - | - | |
Gma08g03098 | 396 | MobiDBLite | consensus disorder prediction | 258 | 272 | - | - | |
Gma08g03098 | 396 | SMART | rrm1_1 | 83 | 156 | IPR000504 | GO:0003723 | |
Gma08g03098 | 396 | MobiDBLite | consensus disorder prediction | 275 | 311 | - | - | |
Gma08g03098 | 396 | PANTHER | SERINE/ARGININE-RICH SPLICING FACTOR SR45A-LIKE ISOFORM X1 | 41 | 315 | - | - | |
Gma08g03098 | 396 | PANTHER | TRANSFORMER-2-RELATED | 41 | 315 | - | - | |
Gma08g03098 | 396 | MobiDBLite | consensus disorder prediction | 41 | 68 | - | - | |
Gma08g03098 | 396 | MobiDBLite | consensus disorder prediction | 41 | 85 | - | - | |
Gma08g03098 | 396 | MobiDBLite | consensus disorder prediction | 250 | 396 | - | - | |
Gma08g03098 | 396 | MobiDBLite | consensus disorder prediction | 158 | 233 | - | - | |
Gma08g03098 | 396 | MobiDBLite | consensus disorder prediction | 347 | 363 | - | - | |
Gma08g03098 | 396 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 84 | 153 | IPR000504 | GO:0003723 | |
Gma08g03098 | 396 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 82 | 160 | IPR000504 | GO:0003723 | |
Gma08g03098 | 396 | MobiDBLite | consensus disorder prediction | 186 | 213 | - | - | |
Gma08g03098 | 396 | SUPERFAMILY | RNA-binding domain, RBD | 74 | 186 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma08g03098 | Gma-Chr8 | 47719464 | 47723836 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma08g03098 | 83 | 197 | Eukaryotic Initiation Factors Gene Family | AT2G36660 | 31.304 | 1.82e-08 | 54.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma08g03098 | - | - | gmx:100805126 | 338.961 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma18g00634 | 18 | 6304160 | 6311089 | Gma08g03098 | 08 | 47719464 | 47723836 | GST |