Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03093 ATGCCACAAGAGAGCTCCCAAAACTCATTTTTTACATCTCCTTCAAAGAGAGGATTGAAGAGTTTGGTCTCCATCAACAAGGAGGCTTCATGCACTGCTGCCACAGAAGAGAGTTTCAATGATAATGAATTGGCTCAGAGGAAGGCAGAGGAAGCAGCTTTGAGAAGATACAAAGCAACAGAATGGCTACGTGAAATGGACCATGTGGCATCATCATCACTCTCTCCAACACCCTCCCAACAAGACTTTTGCCTTTCACTCCGCAATGGCCTCATTCTATGCAATGTCCTCAACAAAGTCAACCCCGGTGCTGTCCTTAAGGTGGTGGACAATCCTGGGCTTGCTGTTCAGTCTGCAGAGGGCGCGGCCCACTCTGCAATTCAGTATTTTGAGAACATGAGGAACTTTTTGGAGGCTGTTAAGGATATGCAACTTCTCACATTTGAAGCATCTGATTTGGAGAAGGGAGGTTCATCAAATAAAGTTGTGGACTGCATTCTATGTTTGAAAGGGTTTTATGAATGGAAGTTATCTGGTGGGGTTGGTGTATGGAGATATGGTGGAACTGTGAGGATCACTTCCTTTCCAAAGAAGTCTCCTTCCTCCATAGTTGGCAGTGAAAGTGCTGATGAATCATTGGATGAGCCAGAATCATCACAGTATGAACAACTGCTAGAATTTCTTCAACTATCTGAAGACTTTTTGATTGAAGAAACCAGAACTGCCAATGCTCTTGCTTTCCTTTATGATCACTTTGGACTCAGACTTCTTCAGGCTTACCTTAGAGAGGCCAATGGGATTGAAGATCTGCCTTTGAATGCAATGGTAATTGATACCTTACTCAGCAAGGTAGTCAAAGATTTCTCATCTTTGCTTGTTTCTCAAGGCAATCAGCTTGGACTTTTCCTGAAGAAAATACTAAAAGTTGATATTGGTTGTCTCTCAAAGAGAGAGTTCATAGAAGCCATCTCACTATATCTTAACCAAAGAAGTAGTTTGGCATCAAATGATTTCTCCAAATTCTGCAATTGTGGTGGAAAACGTGATAGTATTCGACAGAATGCCAATTATTCTGCAAAATATGTTGAAGTGATCAATACTCAACAGAAACAACTTGAGGGTATGAAGTACTTTTTTGAAGAGACAAAATTGGAGGTCAGACAAATTCAATCAGAATGGGAAGAAGAATTGAGTAGGCTAGAGCATCATATCAAAAGCCTTGAAGTGGCCTCCTCTTCCTACCACAAACTTTTGGAGGAGAACCGCCTTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTCTATTGTAGAGTAAGGCCATTCTTACCAGGACAATCAAATGGACCCTCTACAGTAGACTATATTGGAGAAAATGGAGATATGATGATTGTAAATCCCCTTAAGCATGGAAAAGATGCTAGAAGGGTTTTTTCATTCAATAAGGTGTTTGGAACAAGTGTAACACAAGAACAAATTTATGCTGACACTCAATCATTGATCAGATCTGTTTTAGATGGTTATAATGTATGCATCTTTGCATACGGACAAACTGGCTCAGGGAAAACATACACAATGAGTGGCCCTGATCTGACAACTGAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTATTTCATATATCAAAGGAAAGGGCAGGTTCCATAAAATATGAAGTTTTTGTTCAGATGATTGAAATCTACAATGAACAAGTGAGAGATTTATTAGTCAGTGATGGCTCTAACAGAAGATATCCTTTAAGCAATGCTTATATCTTGCAATGGCATTTATTTTGTATCCTTTTCAGTTCCTTAACAAGATATACATTAGACATACGAAACACTTCTCAATTGAATGGCATCAATGTGCCTGATGCATTTTTAGTTCCGGTTACTTGTACTCAAGATGTTCTAGACTTGATGAGAATTGGTCAGAAGAATCGTGCCGTGGGTGCTACAGCTCTAAACGAGAGAAGCAGCCGTTCTCATAGTGTTTTGACTGTTCATGTTAGAGGAAGGGAGTTAGTTTCCAACTCCATTCTTAGAGGCTGTCTTCATCTTGTGGATTTGGCTGGAAGTGAGAGGGTTGACAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCTCAACATATAAATAGATCACTATCTGCACTAGGGGATGTTATCTCTGCCTTGGCACAGAAGAGTCCACATATCCCTTATAGAAATAGCAAGCTCACACAAGTGTTACAAGATTCTTTAGGAGGGCATGCTAAAACTTTGATGTTTGTTCATATAAATCCTGAACTTAATGCTATTGGGGAGACACTTAGCACACTCAAGTTTGCTGAGAGGGTTTCGTCCATTGAACTTGGAGCTGCTCAATCTAACAAAGAAACCGGTGAAATCCGAGATCTAAAGGAAGAGATATCAAGTCTCAGATTAGCATTGGAGAAGAAGGAAGCTGAATTGGAGCAATGGAAGGCAGGGAATGCTCGAAACGCCCTTGATTCTCAAAAACCAAGAGCTGTTTCACCTTTTCAATTACCAAAATATGGCACTAGTGGCAATATGAAGCATGAAACTGGTCAAAGACTCATGGATGATAGAAGCTTTGAGTCTAGAAGTTGCTCTTCTGGTAAGCAAAGAAGGTCAAGGTTTCCCTCATCATTTATAGACAAGGACTCTATGCCAAAAATGACTCTTCTGAGTGAAGAAAAGTTAGTGAGCTCAGGGAAAGGAAGATCACCATCTCCTCCAGTGAGAAGATCATTATCAAATGATAGAGGGACAGTCATTAAAAGCAAGGCTAAAACTGAAACAACAGACAACCAACCAATATTAAAGCATCCATTTCCTGCTAGAGTACCAGCTAACAAATCCATTTCCACAATGCCAGTGGCTTCATCCACTGACAACAACACAAGAATGTATGTGAATTCACAAGAGCCGGTAAAGCAGGAAAACATTTCTGAAACACTCTTCAACCTCCAGAAGGTAAACTATAAGAAAGTACATCAAGAACATGAAGAGGAACAATTCAAGCAAGCACTCAGTGCAGTAAGACAAGGTGGTATTAGAAAAAGCAAGTTTGAGAGTAAGGCTAAAGCCAAGCATCCTCCTCAACTATTATCACCCTTTAAGATTCAAAAGCCTGATTTGATCGCAACATTTATTCCTGACATGGATTTTGCTGGTGAAATGACTTTGGAGCCAACTCCAAAGAACGATTACTCTGAGGCTGAAAATGATCTTAGATTTATGGAGTCTGCTGTCCATGGTGCTTTGAGTCTCAAAAAAATACGCCAGAACTTTGCAAGGAATTTTCAGAACCTTGAATCAAGAGGAATAGTGCAAACAGGAGAGCCTTTATTGGTTAGCAAAGTTGAAAACAAAGTCGTGAATGGTTCGGGTAGCAATCTTAAAGAAGGAAGCAATGCATCCACGCCTGAATTTAGAAGGAGCCGATCTACCCCACGTGGAAAGTTTTTTGGTTTATCTTGA 3498 0.4042 MPQESSQNSFFTSPSKRGLKSLVSINKEASCTAATEESFNDNELAQRKAEEAALRRYKATEWLREMDHVASSSLSPTPSQQDFCLSLRNGLILCNVLNKVNPGAVLKVVDNPGLAVQSAEGAAHSAIQYFENMRNFLEAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGFYEWKLSGGVGVWRYGGTVRITSFPKKSPSSIVGSESADESLDEPESSQYEQLLEFLQLSEDFLIEETRTANALAFLYDHFGLRLLQAYLREANGIEDLPLNAMVIDTLLSKVVKDFSSLLVSQGNQLGLFLKKILKVDIGCLSKREFIEAISLYLNQRSSLASNDFSKFCNCGGKRDSIRQNANYSAKYVEVINTQQKQLEGMKYFFEETKLEVRQIQSEWEEELSRLEHHIKSLEVASSSYHKLLEENRLLYNQVQDLKGAIRVYCRVRPFLPGQSNGPSTVDYIGENGDMMIVNPLKHGKDARRVFSFNKVFGTSVTQEQIYADTQSLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLTTEETWGVNYRALRDLFHISKERAGSIKYEVFVQMIEIYNEQVRDLLVSDGSNRRYPLSNAYILQWHLFCILFSSLTRYTLDIRNTSQLNGINVPDAFLVPVTCTQDVLDLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGRELVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAIGETLSTLKFAERVSSIELGAAQSNKETGEIRDLKEEISSLRLALEKKEAELEQWKAGNARNALDSQKPRAVSPFQLPKYGTSGNMKHETGQRLMDDRSFESRSCSSGKQRRSRFPSSFIDKDSMPKMTLLSEEKLVSSGKGRSPSPPVRRSLSNDRGTVIKSKAKTETTDNQPILKHPFPARVPANKSISTMPVASSTDNNTRMYVNSQEPVKQENISETLFNLQKVNYKKVHQEHEEEQFKQALSAVRQGGIRKSKFESKAKAKHPPQLLSPFKIQKPDLIATFIPDMDFAGEMTLEPTPKNDYSEAENDLRFMESAVHGALSLKKIRQNFARNFQNLESRGIVQTGEPLLVSKVENKVVNGSGSNLKEGSNASTPEFRRSRSTPRGKFFGLS 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03093 1165 MobiDBLite consensus disorder prediction 1134 1165 - -
Gma08g03093 1165 PRINTS Kinesin heavy chain signature 657 674 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g03093 1165 PRINTS Kinesin heavy chain signature 737 758 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g03093 1165 PRINTS Kinesin heavy chain signature 509 530 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g03093 1165 PRINTS Kinesin heavy chain signature 688 706 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g03093 1165 MobiDBLite consensus disorder prediction 918 944 - -
Gma08g03093 1165 Coils Coil 390 410 - -
Gma08g03093 1165 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 22 1160 - -
Gma08g03093 1165 SMART ch_5 55 172 IPR001715 GO:0005515
Gma08g03093 1165 Pfam Kinesin motor domain 440 787 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g03093 1165 Gene3D Kinesin motor domain 377 789 IPR036961 -
Gma08g03093 1165 PANTHER KINESIN-LIKE PROTEIN KLP-3 22 1160 - -
Gma08g03093 1165 SMART kinesin_4 432 795 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g03093 1165 SUPERFAMILY Calponin-homology domain, CH-domain 47 201 IPR036872 -
Gma08g03093 1165 MobiDBLite consensus disorder prediction 1134 1152 - -
Gma08g03093 1165 MobiDBLite consensus disorder prediction 830 972 - -
Gma08g03093 1165 ProSiteProfiles Calponin homology (CH) domain profile. 53 174 IPR001715 GO:0005515
Gma08g03093 1165 Pfam Calponin homology (CH) domain 56 174 IPR001715 GO:0005515
Gma08g03093 1165 ProSiteProfiles Kinesin motor domain profile. 434 787 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma08g03093 1165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 435 824 IPR027417 -
Gma08g03093 1165 MobiDBLite consensus disorder prediction 860 878 - -
Gma08g03093 1165 Coils Coil 801 828 - -
Gma08g03093 1165 Gene3D - 45 173 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03093 Gma-Chr8 47617887 47627553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03093 425 787 Calmodulin-binding Proteins AT5G65930 40.217 5.21e-71 258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03093 08 47617887 47627553 Gma08g03093 08 47617887 47627553 ECH
Gma18g00682 18 6994151 7004269 Gma08g03093 08 47617887 47627553 GST
Gma08g03093 08 47617887 47627553 Gma14g00106 14 876065 885151 PCT
Gma08g03093 08 47617887 47627553 Gma02g02833 02 53816077 53829221 PCT
Gma14g00106 14 876065 885151 Gma08g03093 08 47617887 47627553 PCT
Gma02g02833 02 53816077 53829221 Gma08g03093 08 47617887 47627553 PCT