Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03092 ATGCCTGGAAGCTTAAGGAATCTGTCACTTTTTCCCAAAATCTTCTCCTTCACCTTGCTTCTCATCTTATTAAACTCCCTTCTCTTTTTCCCATGCTGTTACTCTCTTGATGAGCAAGGCCAAGCTCTTATAGCATGGAAAAACACCTTAAACATCACTTCAGATGTGTTAGCATCATGGAACCCTTCAGCCTCAAGCCCATGCAACTGGTTTGGGGTGTATTGCAACTCACAAGGAGAAGTCGTAGAGTTAAACTTGAAGTCAGTGAACTTGCAAGGCTCATTGCCTTCAAATTTTCAACCTTTAAAAGGGTCCTTGAAGATTCTTGTCCTCTCATCAACCAACCTCACAGGAAGTGTACCAAAAGAGATTAGAGACTATGTAGAGCTCATCTTTGTTGATCTCAGTGGAAATTCTCTCTTTGGTGAAATCCCAGAAGAAATTTGCAGCCTAAGGAAACTGCTGAGTTTGTCTCTCCATATGAACTTCCTCCAAGGAAACATTCCATCCAACATTGGCAATCTAACAAGCCTTGTTAACTTGACACTCTATGACAACCACCTCAGTGGTGAAATTCCAAAGAGCATTGGCTCCTTGAGAAAGCTCCAAGTCTTCAGAGCAGGTGGAAACAAGAATCTCAAGGGTGAGATTCCATGGGAGATTGGAAGCTGCACCAACTTGGTCACGCTAGGCCTTGCAGAAACCAGCATTTCAGGAAGCCTTCCTTCTTCAATCAAAATGCTGAAAAGAATCAATACCATAGCCATATACACAACTCTATTGTCAGGTCCCATTCCAGAAGAGATTGGCAACTGCAGTGAGTTGGAGAACCTGTACTTGCATCAGAACTCTATCTCAGGCTCAATACCAAGCCAAATTGGAGAACTCGGCAAGCTTAAGAGTCTACTTTTGTGGCAGAACAATATCGTAGGAACAATCCCAGAAGAGCTTGGAAGCTGCACAGAGATCGAAGTCATAGATTTGTCAGAAAATCTTCTCACAGGTAGCATACCAAGGAGCTTTGGCAACCTTTCAAATCTCCAAGAGCTTCAACTAAGTGTCAATCAGCTCTCAGGTATAATCCCTCCTGAGATTTCAAATTGTACTTCTCTGAATCAACTGGAACTTGACAACAATGCTCTCTCTGGTGAGATTCCTGATCTTATTGGCAACTTGAAAGACTTGACTCTTTTCTTTGCATGGAAGAACAAATTAACAGGAAACATCCCAGATAGTCTTTCTGAGTGCCAAGAACTTGAGGCAATTGATCTCTCTTACAACAACTTGATTGGTCCAATTCCCAAACAACTATTTGGGTTGAGGAACCTCACCAAGCTTCTGCTTCTTTTTAATGATTTATCAGGCTTTATACCACCTGATATAGGAAACTGCACTAGCCTCTACAGGCTGAGGTTGAATCACAATAGACTAGCAGGTAGCATTCCACCAGAAATTGGCAACTTGAAGAGTTTGAACTTTATGGACATGAGCAGCAATCATCTTTCAGGGGAGATTCCTCCAACGCTATATGGATGCCAGAATCTTGAGTTTCTAGACCTTCATTCCAACAGTATCACTGGTTCTGTTCCAGATTCTCTTCCCAAAAGCCTTCAGTTGATTGACTTGTCCGACAACAGACTAACAGGTGCATTGAGTCACACAATTGGTTCATTGGTTGAGTTAACCAAACTCAACCTTGGGAACAATCAGCTAAGTGGAAGAATCCCATCAGAGATCTTGTCTTGCACGAAGCTACAACTTCTGGACTTGGGAAGCAATAGCTTCAATGGAGAAATTCCCAATGAAGTTGGTCTAATTCCTTCTCTGGCAATATCTCTCAATCTTAGCTGCAACCAGTTTTCTGGTAGAATTCCTTCCCAGTTCTCGAGTCTTACCAAACTAGGAGTTCTTGATCTCTCACATAACAAGCTCTCGGGGAATTTAGATGCTCTTTCCGACCTTGAGAATCTTGTTTCCTTAAATGTTTCCTTCAATGGCCTCTCTGGTGAGTTGCCTAACACCTTATTCTTCCACAAGCTTCCTCTTAGTGATCTTGCTGAAAATCAAGGTCTCTACATTGCTGGAGGTGTTGCAACTCCTGGTGACAAAGGTCATGTTAGATCAGCCATGAAGTTCATTATGTCCATTCTCTTAAGCACCAGTGCAGTACTAGTGCTTCTCACAGTCTATGTCTTAGTCAGAACTCATATGGCCAACAAGGTGCTTATGGAAAATGAAACTTGGGAGATGACTTTGTATCAGAAGCTAGATTTCTCCATTGATGACATTGTCATGAATTTGACATCAGCCAATGTGATTGGCACTGGAAGCTCCGGAGTTGTGTACAAAGTTACAATTCCAAATGGTGAAACATTGGCTGTTAAGAAGATGTGGTTAGCAGAAGAGTCAGGAGCATTCAATTCTGAAATTCAAACATTGGGGTCAATAAGGCACAAGAACATCATCAGGCTTCTTGGATGGGGATCAAACAAGAGCCTGAAGTTGTTGTTTTATGACTACCTGCCTAATGGAAGCCTGAGCTCATTACTTCATGGTTCAGGAAAGGGAAAAGCTGAATGGGAGACAAGATATGATGCTATATTAGGTGTGGCACATGCACTTGCATATTTGCACCATGATTGTTTGCCTGCTATTATTCATGGAGATGTCAAAGCCATGAATGTGTTACTAGGCCCTGGACACCAACCTTACCTTGCTGACTTTGGCCTGGCAAGAACTGCAACTGAAAATGGTTGCAATACTGATTCCAAGCCACTTCAAAGACATTACCTTGCTGGTTCATATGGATACATGGCTCCTGagcatgcatcactgcagcctataactgaaaagagtgatgtgtacagttttggcatggttctacttgaggttctcacaggaaggcacccATTAGACCCAACTCTACCAGGGGGTGCACACTTGGTTCAGTGGGTTAGGAACCACTTGTCTAGCAAAGGAGATCCTTCTGACATTCTTGACACAAAGCTTAGAGGGAGGGCTGATCCCACCATGCATGAAATGCTACAAACTCTAGCAGTGTCCTTTCTATGTGTAAGCACTAGAGCTGATGAGAGGCCAACAATGAAGGATGTTGTTGCAATGCTCAAGGAAATTAGACCCCTTGAGACCTCAAGGGCAGACCCTGATGTATTGAAGGGAGGTTTAACAGCACATAGTTCACCACCACCTCCTAAGAATGTGGTCTCACATGGATCTTCGACATGTTCCTACAATTTCTCGGATAACTCAATCAATTGA 3279 0.4154 MPGSLRNLSLFPKIFSFTLLLILLNSLLFFPCCYSLDEQGQALIAWKNTLNITSDVLASWNPSASSPCNWFGVYCNSQGEVVELNLKSVNLQGSLPSNFQPLKGSLKILVLSSTNLTGSVPKEIRDYVELIFVDLSGNSLFGEIPEEICSLRKLLSLSLHMNFLQGNIPSNIGNLTSLVNLTLYDNHLSGEIPKSIGSLRKLQVFRAGGNKNLKGEIPWEIGSCTNLVTLGLAETSISGSLPSSIKMLKRINTIAIYTTLLSGPIPEEIGNCSELENLYLHQNSISGSIPSQIGELGKLKSLLLWQNNIVGTIPEELGSCTEIEVIDLSENLLTGSIPRSFGNLSNLQELQLSVNQLSGIIPPEISNCTSLNQLELDNNALSGEIPDLIGNLKDLTLFFAWKNKLTGNIPDSLSECQELEAIDLSYNNLIGPIPKQLFGLRNLTKLLLLFNDLSGFIPPDIGNCTSLYRLRLNHNRLAGSIPPEIGNLKSLNFMDMSSNHLSGEIPPTLYGCQNLEFLDLHSNSITGSVPDSLPKSLQLIDLSDNRLTGALSHTIGSLVELTKLNLGNNQLSGRIPSEILSCTKLQLLDLGSNSFNGEIPNEVGLIPSLAISLNLSCNQFSGRIPSQFSSLTKLGVLDLSHNKLSGNLDALSDLENLVSLNVSFNGLSGELPNTLFFHKLPLSDLAENQGLYIAGGVATPGDKGHVRSAMKFIMSILLSTSAVLVLLTVYVLVRTHMANKVLMENETWEMTLYQKLDFSIDDIVMNLTSANVIGTGSSGVVYKVTIPNGETLAVKKMWLAEESGAFNSEIQTLGSIRHKNIIRLLGWGSNKSLKLLFYDYLPNGSLSSLLHGSGKGKAEWETRYDAILGVAHALAYLHHDCLPAIIHGDVKAMNVLLGPGHQPYLADFGLARTATENGCNTDSKPLQRHYLAGSYGYMAPEHASLQPITEKSDVYSFGMVLLEVLTGRHPLDPTLPGGAHLVQWVRNHLSSKGDPSDILDTKLRGRADPTMHEMLQTLAVSFLCVSTRADERPTMKDVVAMLKEIRPLETSRADPDVLKGGLTAHSSPPPPKNVVSHGSSTCSYNFSDNSIN 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03092 1092 ProSiteProfiles Protein kinase domain profile. 767 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03092 1092 PRINTS Leucine-rich repeat signature 537 550 - -
Gma08g03092 1092 PRINTS Leucine-rich repeat signature 631 644 - -
Gma08g03092 1092 SMART serkin_6 767 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03092 1092 MobiDBLite consensus disorder prediction 1052 1080 - -
Gma08g03092 1092 Gene3D Phosphorylase Kinase; domain 1 731 840 - -
Gma08g03092 1092 Pfam Protein kinase domain 770 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03092 1092 ProSitePatterns Serine/Threonine protein kinases active-site signature. 885 897 IPR008271 GO:0004672|GO:0006468
Gma08g03092 1092 SUPERFAMILY RNI-like 83 382 - -
Gma08g03092 1092 SMART LRR_typ_2 175 199 IPR003591 -
Gma08g03092 1092 SMART LRR_typ_2 440 464 IPR003591 -
Gma08g03092 1092 SMART LRR_typ_2 344 368 IPR003591 -
Gma08g03092 1092 SMART LRR_typ_2 488 512 IPR003591 -
Gma08g03092 1092 SMART LRR_typ_2 558 582 IPR003591 -
Gma08g03092 1092 SMART LRR_typ_2 631 653 IPR003591 -
Gma08g03092 1092 SMART LRR_typ_2 654 678 IPR003591 -
Gma08g03092 1092 SMART LRR_typ_2 296 320 IPR003591 -
Gma08g03092 1092 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 1058 - -
Gma08g03092 1092 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 1058 - -
Gma08g03092 1092 Gene3D Transferase(Phosphotransferase) domain 1 841 1057 - -
Gma08g03092 1092 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Gma08g03092 1092 Gene3D Ribonuclease Inhibitor 329 433 IPR032675 -
Gma08g03092 1092 Gene3D Ribonuclease Inhibitor 434 534 IPR032675 -
Gma08g03092 1092 Gene3D Ribonuclease Inhibitor 611 695 IPR032675 -
Gma08g03092 1092 Gene3D Ribonuclease Inhibitor 196 328 IPR032675 -
Gma08g03092 1092 Pfam Leucine rich repeat 466 525 IPR001611 GO:0005515
Gma08g03092 1092 Pfam Leucine rich repeat 298 357 IPR001611 GO:0005515
Gma08g03092 1092 Pfam Leucine rich repeat 612 667 IPR001611 GO:0005515
Gma08g03092 1092 ProSitePatterns Protein kinases ATP-binding region signature. 773 796 IPR017441 GO:0005524
Gma08g03092 1092 ProSiteProfiles Leucine-rich repeat profile. 633 655 IPR001611 GO:0005515
Gma08g03092 1092 SUPERFAMILY Protein kinase-like (PK-like) 766 1052 IPR011009 -
Gma08g03092 1092 SUPERFAMILY RNI-like 289 658 - -
Gma08g03092 1092 Gene3D Ribonuclease Inhibitor 535 610 IPR032675 -
Gma08g03092 1092 Gene3D Ribonuclease Inhibitor 36 195 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03092 Gma-Chr8 47609238 47613183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03092 33 1091 Receptor kinase-like Gene Family AT5G56040 67.697 0.0 1425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma08g03092 Pkinase 1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03092 - - gmx:100792943 2123.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03092 08 47609238 47613183 Gma08g03092 08 47609238 47613183 ECH