Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03061 ATGGCTGAAACTGCAGTGTCCCTTCTATTCGACCATTTGGTGAAGTTACTGAGTGAGGAAACAACAATCTTAAAAAATGTGCACAAGGAGGTTGAGGGCATCAAGGATCAGCTAAGCCTAATAAACTCTTACATAAGGGATGCAGAAAAGAAGCAGCAGAAAGATGCTGTCAAAGAATGGTTGAATTCATTGAGGAATGTGGCGTTTCGCATGGAGGATGTGGTTGATCACTATTTGCTCAAAGTGGCAGAGCGTGGTCAAAGAGATGGGGCTTTTGGTGTAGTTACTGAAGTCAAGGAGAAGTTCAAAACTGTAACACATCGTCATGATATTGCATCTGAGATTAAACATGTAAGAGAAACTCTAGATAGTCTCTGCAGTCTCAGAAAAGGCTTGGGACTCCAACTATCTGCTAGTGCTCCTAATCATGCAACTCTAAGGTTAGATGCTTATTTTGTCGAGGAATCTCAACTTGTTGGTATTGATCGTAAGAAGCGAGAGCTCACAAATTGGCTAACAGAAAAGGAGGGTCCAGTGAAGGTGGTGGTTGGCCCAGGAGGGATAGGTAAAACGGCAATTGTGAAGAATGTGTACAACATGCAAGAGCAGGTAAGCCTTCAGAAGAAGGGAACAAGCTATTTCGAGTTTTGTGCATGGATAACCATGTCTGGGCCTCAAGTTGATGATCATAATATGCTGATAATAAGGCAGATTATAGAAAATATACTCGAGAAGGACCCCGGTGCATCAGCTACATTGCAGAAGGAAACAACAGCTATACACTCTCTTATAAGAAAAGTAAGAGAATACTTAAAAGATAAGAGGTACCTCATTGTGTTTGATGATGTGCATAGTTCAAAATTTTGGAATGTTATCAAGCATGCCCTAACTCCAAACAGAAGCAAAAGCAGTAAGGTTATTATCACTACACGAGATGAAAATGTTGCAAAATTTATTGGAAGTGATGATGTATATAAAGTAGAACCTCTGTCTCAAAGTGATGCTTTGAAGCTCTTTTGTCACAAGGTATTTCAATCTGAGAAAGTAGAAAACCCTGAATTGAATGCTTTGTCCCAAGAGTTTGTGGAGAAAAGTGATGGGGTGCCAGTGGCTATTGTGACTTTTGCTGGTCTCCTAGCAACAACGAGTAAAACTACCACTAAATGGAGAATGGTACTCAACAAACTCGACTCACTATTACAAAGAAACTCTCTTTTTGACAGTATGAAAGAAGTGATGTTAGAAAGTTACCATGATCTTCCTTCCCACCTCAAGAGGTGTTTCTTGTACTTTGGCATTTTCCCTGAGGGCTACTCCATTAGTTGCATGAGACTCGTTCGTTTGTGGGTAGCTGAGGGTTTTGTAGAGAAAAGAGATGATACATCAATGGAGGAATTGGCAAAAGAATACTTAACTGAGCTTATCCGTAGATGCTTGGTTCATCTTTCAAGGGTCGATTTTGATGGAAGACCCAAAAGTTGTCACGTGTATGACCTCATGCATAAGTTAATAGCCAGGATTTGTGAGGAGCAAATGTTTTGTCAAGTAATGAAAGATAAAACCGCACCATCATCATCTAACTCCAACTTGGATTCATCACTTCCTAGACGCTTATCAATAATAAAAAGCTGGGATGCTGCTGCCATGAAAAGAGCTGAAAAGTGGGAGAAGGTTCGGTCTTGTTTTGTTTTTGATGATGCCAAGAAGTGGCTGGTGACAAAAGAATTATTCTCAAGTTTTGAGCTTTTGAGTCAATTAGACTTGTCTAATGCACGCCTTGATAATCTTCCTAAAAAAGTTGGGAATCTATTCAACTTGAAATACTTGAGCCTGAGGAACACCAACATCAAGTCAATTCCAGAATCCATTGGCAACCTAGAGAGGTTGCAAACTCTAGACCTAAAGCGAACTCAAGTGGATGTACTACCAAAGAAGATTAAGAACCTTGTCAAGTTGCGTCATCTCCTTGCTTATTTTATATATAATCAAAATTCCGGTTTGGACCGCTTACAAGGAGTGAAGGTAAATGAAGGGCTTAAAAATCTAACATCATTGCAGAAACTTTCTTTTTTGGATGCAAGTGATGGTAGCGTAATAGAGGAACTGAAACAACTAGAGAAATTAAGGAAGCTGGGGATTATAAAGCTAAGAGAAGAATATGGTGAAGAATTATGCAAGGTTATTGAGAAAATGGATCATCTATGTTCCTTAAGCATTGGGGCTATGGGAAATGATGATGGCAATCATGGCATGCTTCAGTTGAAATCTATAAGGAATCCTCCATCGTCCCTTCAACGCCTTTACCTATATGGGCGTTTAGAAAGGCTTCCAAGTTGGATATCAAAAGTTCCAAATCTTATCAGATTATGCTTGAGGTGGTCTATTCTAAAGGAAGATCCATTGCCTTACCTTAAAGACTTGTCAGAATTGTCGTACCTTGAGTTCTATGATGCTTATGGTGGTGATGAGTTGCATTTCAAGAATGGATGGTTGAAGAGACTAAAGGTTTTGTGCCTTGAGTCCTTGCCAAAGTTGAAGACCATAAAGATTGATGAAGGAGCAATTCCTCTTCTTGCAGAGTTGAAGATAGGGAAATGCCATGAAATGGTGAAGGTTCCCAGAGATATACAGAACTTGACAAGTCTTCAAAAGCTTTATCTCTATGATATGCATGAACAATATATTAATCGAATGGTTGATACTCAAAGTGAAGACTACAAGATTATTAACAAAATACCTCTTGTGGAATACTCCAAAGATGACCATTTTTCATTATACTGA 2781 0.3923 MAETAVSLLFDHLVKLLSEETTILKNVHKEVEGIKDQLSLINSYIRDAEKKQQKDAVKEWLNSLRNVAFRMEDVVDHYLLKVAERGQRDGAFGVVTEVKEKFKTVTHRHDIASEIKHVRETLDSLCSLRKGLGLQLSASAPNHATLRLDAYFVEESQLVGIDRKKRELTNWLTEKEGPVKVVVGPGGIGKTAIVKNVYNMQEQVSLQKKGTSYFEFCAWITMSGPQVDDHNMLIIRQIIENILEKDPGASATLQKETTAIHSLIRKVREYLKDKRYLIVFDDVHSSKFWNVIKHALTPNRSKSSKVIITTRDENVAKFIGSDDVYKVEPLSQSDALKLFCHKVFQSEKVENPELNALSQEFVEKSDGVPVAIVTFAGLLATTSKTTTKWRMVLNKLDSLLQRNSLFDSMKEVMLESYHDLPSHLKRCFLYFGIFPEGYSISCMRLVRLWVAEGFVEKRDDTSMEELAKEYLTELIRRCLVHLSRVDFDGRPKSCHVYDLMHKLIARICEEQMFCQVMKDKTAPSSSNSNLDSSLPRRLSIIKSWDAAAMKRAEKWEKVRSCFVFDDAKKWLVTKELFSSFELLSQLDLSNARLDNLPKKVGNLFNLKYLSLRNTNIKSIPESIGNLERLQTLDLKRTQVDVLPKKIKNLVKLRHLLAYFIYNQNSGLDRLQGVKVNEGLKNLTSLQKLSFLDASDGSVIEELKQLEKLRKLGIIKLREEYGEELCKVIEKMDHLCSLSIGAMGNDDGNHGMLQLKSIRNPPSSLQRLYLYGRLERLPSWISKVPNLIRLCLRWSILKEDPLPYLKDLSELSYLEFYDAYGGDELHFKNGWLKRLKVLCLESLPKLKTIKIDEGAIPLLAELKIGKCHEMVKVPRDIQNLTSLQKLYLYDMHEQYINRMVDTQSEDYKIINKIPLVEYSKDDHFSLY 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03061 926 Pfam Rx N-terminal domain 5 86 IPR041118 -
Gma08g03061 926 ProSiteProfiles Leucine-rich repeat profile. 605 626 IPR001611 GO:0005515
Gma08g03061 926 Gene3D - 416 507 IPR036388 -
Gma08g03061 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 431 IPR027417 -
Gma08g03061 926 Gene3D Ribonuclease Inhibitor 549 903 IPR032675 -
Gma08g03061 926 PANTHER DISEASE RESISTANCE PROTEIN RP 16 893 IPR044974 GO:0006952
Gma08g03061 926 SUPERFAMILY L domain-like 550 894 - -
Gma08g03061 926 Gene3D - 143 325 IPR027417 -
Gma08g03061 926 CDD RX-CC_like 2 125 IPR038005 -
Gma08g03061 926 Pfam NB-ARC domain 163 413 IPR002182 GO:0043531
Gma08g03061 926 Gene3D - 329 415 IPR042197 -
Gma08g03061 926 Gene3D - 4 112 - -
Gma08g03061 926 PRINTS Disease resistance protein signature 179 194 - -
Gma08g03061 926 PRINTS Disease resistance protein signature 270 284 - -
Gma08g03061 926 PRINTS Disease resistance protein signature 365 379 - -
Gma08g03061 926 PRINTS Disease resistance protein signature 624 640 - -
Gma08g03061 926 PANTHER - 16 893 - -
Gma08g03061 926 Pfam Leucine rich repeat 583 638 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03061 Gma-Chr8 47232425 47240877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03061 582 887 Receptor kinase-like Gene Family AT3G47580 26.524 7.19e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03061 K13457 - gmx:100782327 1788.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00715 18 7492514 7495838 Gma08g03061 08 47232425 47240877 GST