Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03052 ATGTCACCTTCTTTTTGCACATCCCTCTTCCTCTTCACACTCTCCCTTCTCTTCTTCCTATTCTTCTCCCTCTCCGTCTCCGCCCACAGCGGCCACCACGACGACGGTGACGCCGACTCCGACGCCACCCCCGACCTCCGTGCTCGGCCCTTGATTCTCGCGAAGGTGTGGTGCCTGATCGTGATCTTCATCGCCACCTTCGTCTCGGGCGTTTCCCCCTACATTCTGAAATGGAACGAGGGGTTCTTGGTTCTGGGGACCCAGTTTGCTGGGGGAGTGTTTCTGGGAACTGCCATGATGCATTTTCTCAGCGACGCTAATGAGACCTTCGGGGACTTGACTCAAAAGGAGTACCCTTTCGCCTTCATGCTGGCGTGTGCAGGCTACTTGATGACCCTCCTCGCTGATGCCGTCATTTCCTCGCTTTTCAACAATATGGGGCGTCATGCCCAGGATGTCCAAGGTCAAGGGGCTGATGTGAACAAATTAAGTAGCAACGGCGTTACTTCTCAATCACAACACCGGAGCCATGACGCTAATCACCATTTAGCAAGTCCTGCACTTGGATATGTCCATTCAGTTGGAGACACCGTTTTATTGATTGTTGCCCTTTGTGCACATTCTGTGTTTGAGGGCTTAGCAATTGGAGTTGCAGAGACCAAAGCAGATGCATGGAAAGCCTTGTGGACAATATGTCTGCACAAGATATTTGCAGCCATTGCCATGGGAATTGCTCTCCTAAGAATGATTCCTGACCGTCCCCTTGTGTCGTGTGCTGTCTATGCTTTCGCGTTTGCCATCTCCAGTCCAATTGGTGTGGCCATTGGAATCATATTGGATGCCACAACACAGGGTCACGTGGCGGATTGGATCTTTGCTATATCAATGGGTCTGGCTTGTGGAGTGTTTATCTATGTATCAGTAAACCATCTGTTGGCAAAAGGGTACATGCCCCACAGACCGACAAAGGTTGACTCGGCCTATTTCAAGTTTCTTGCTGTGTTCTTGGGTGTGGGAGTGATAGCGGTGGTAATGATTTGGGACACCTAA 1050 0.5086 MSPSFCTSLFLFTLSLLFFLFFSLSVSAHSGHHDDGDADSDATPDLRARPLILAKVWCLIVIFIATFVSGVSPYILKWNEGFLVLGTQFAGGVFLGTAMMHFLSDANETFGDLTQKEYPFAFMLACAGYLMTLLADAVISSLFNNMGRHAQDVQGQGADVNKLSSNGVTSQSQHRSHDANHHLASPALGYVHSVGDTVLLIVALCAHSVFEGLAIGVAETKADAWKALWTICLHKIFAAIAMGIALLRMIPDRPLVSCAVYAFAFAISSPIGVAIGIILDATTQGHVADWIFAISMGLACGVFIYVSVNHLLAKGYMPHRPTKVDSAYFKFLAVFLGVGVIAVVMIWDT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03052 349 PANTHER ZINC/IRON TRANSPORTER 32 348 - -
Gma08g03052 349 Pfam ZIP Zinc transporter 53 344 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gma08g03052 349 PANTHER ZINC TRANSPORTER 11 32 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03052 Gma-Chr8 47159170 47162188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03052 31 349 Inorganic Solute Cotransporters AT1G55910 60.550 1.61e-138 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03052 K14709 - gmx:100809940 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03052 08 47159170 47162188 Gma08g03052 08 47159170 47162188 ECH
Gma18g00721 18 7591069 7593970 Gma08g03052 08 47159170 47162188 GST