Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma08g03041 | ATGTCGTTTGTCTTATCACTCCATTTTCTTAGACACTTTGGCAGTAGTTTTCTGACATTTTTCGTGAAGCCAATTTTCATGCATGGCTTATCTGGTTTCCTTCATCTACTGTTGTTAGTGGCGCTTTTAGTGTCACTGGTGTGGAAGAAAGTCACAGTTGGAGCCAGAGAAAGTTCCAAAGAGAAAATTAATAACACCTTGTTTCCAAGGACAAGGCTTTGTTCTCTGGTTGTTTCTGCATTCAACCTTCTACTCTTTTTGTTTAATTACTTTTGTTGGTATAGAAAAGGTTTGTCACAAGAAAAGCTTGTGACCCTTTTGGATTTAGTGCTCAAAGTGGTTGCTTGGGGTGTTGGTGGTGTTTGCATGCACGATGAGCTCTTCATTTCAAGGGAAAGAAGATTGCCATTCTTCTTCAGAGGTTGGTGTGTCCTCTACCTCTTTGTTTCTGGCTATTGCTTTATAGTGAACATTGTTCTCTATGAAAAGCATGCTGCTTTGCCTATTCAGTGCTTAGGTTCTGATGTTTCCTCTGTTTGTGTGGGTTTATTCTTCTGTTACTTGGGTTTTTTTGTAAAATTTGAGGGTGGAGTGAGAAATAGTACTCTTCAAGAATCTCTTTTGAATGGTGATTCAAATGATAATGATGTGTTTGGGACTAATGAAACCAAGGGGGGTGACACTGTTACCCCTTACTCTTATGCTGGAATTTTCAGCATTCTTACCTTCTCTTGGGTTAGTCCTCTGATTGCTGGTGGCAAGAAGAAGAGTTTGGACCTTGAGGATGTCCCCCAACTTGACAAAAGAGACAGTTTAATTGGAGCATTTCCAATTTTTAGTGATAAGCTTGAGGCATATTGTGGAGCAACTAACACATTAACCACACTTAAGTTAGTGAAGTCATTAGTATTCTCAACCTGGAAAGAGATTATTTTCACAGCTATCCTTGCACTGGTAAACACATTGGCGACTTTTGTCGGTCCCTATCTCATTGATTGTTTTGTTCAATACCTTAATGGAAAACGACAATTTGAAAAAGAGGGCCTTGTTTTGGTGTCTGCATTTTGTGTGGCAAAGCTTGTGGAGTGCCTGACAAAGAGGCACTGGTTCTTTAGGTTGCAGCAGGTTGGAATACGAATGCAAGCACTGCTTGTGACAATCATATATAATAAAGCTTTGAACCTATCATGCCAATCAAAGCAAGGACAGACCACAGGGGAAATAATCAACTTCATGAGTGTTGATGCAGAAAGAGTTGGTGAGTTCAGTTGGCACCTACATGATCTGTGGTTAGTAGTCCTACAGGTTTTAGTAGGCTTGTTGGTTTTATATAAAAATCTTGGGCTTGCTTCAATTGCTGGTTTTGTTGCAATTCTCATTGTAATGTGGGCAAACATTCCCTTGGGTTCAACCCAAGAGAAGTTTCACAACAAGTTGATGGAGTCAAGAGATGAAAGAATGAAAGCGACATCTGAGATTTTGAGGAACATGAGGATTCTCAAACTGCAAGGATGGGAAATGAAGTTTTTGTCTAAGATAACTGAACTCAGAAAGATCGAACAAGGCTGTTTAAAAAAAGTTATATACACTTTAGTCTTGATCATATCTATATTTTGGTGTGCCCCAGCATTTGTATCAGTGGTTACTTTTGGTACTTGTATGGTCATTGGGATCACCCTTGAATCAGGGAAGATCTTGTCTACACTTGCAACATTCCAGATTCTCCAAGAACCCATTTATAATCTTCCAGAGACAATTTCAATGATGGCACAAACTAAGGTTTCTCTTGACAGGATTGCATCTTTCCTTCGTCTCGATGAGATGCTATCTGATGTTGTGAAGAAGCTTCCGCCGGGTAGTTCTGATATAGCAATTGAAGTGGTTGATGGGAATTTCTCTTGGGATTCATTTTCCCCTAATATAACATTGCAAAACATAAATCTAAGAGTTTTTCATGGCATGAGGGTTGCAGTTTGTGGTACTGTTGGATCAGGCAAGTCTACTTTACTTTCTTGTATATTGGGAGAAGTACCAAAGAAATCAGGGATCCTAAAGGTGTGTGGAACAAAGGCCTATGTAGCTCAGTCACCATGGATACAAAGTAGCACCATAGAGGATAATATATTGTTTGGCAAGGATATGGAAAGGGAAAGGTATGAGAAGGTCCTTGAAGCTTGTTGCCTAAAGAAGGATCTAGATATTTTATCATTTGGAGATCAGACTATTATAGGAGAGAGGGGGATAAATTTGAGTGGTGGACAGAAGCAAAGAATACAAATTGCTCGTGCTCTATACCATGATGCTGATATATATCTATTTGATGATGTGTTTAGTGCTGTGGATGCTCATACAGGATCTCATCTTTTTAAGGAATGCTTATTGGACCTTTTGAGTTCAAAGACTGTGGTTTATGTCACCCATCAAGTAGAGTTCTTACCAGCTGCTGACCTTATTTTGGTCTTGAAAGATGGGAAGATTACTCAATGTGGAAAATATAATGATCTACTCAACTCAGGCACTGATTTTATGGAACTTGTTGGTGCTCATAAAGAAGCTTTGTCTGCACTTGATTCATTAGATAGAGGGAAGGAATCTGATAAAATAAGTACATCACAACAGGATATAAGTGTCTCTCTTTCTCATGGAGCTGAAGAAAAAGAAGTGAAGAAAGATGCGCAAAATGGTGTAAAAGATGACAAATGTGGTCCAAAAGGCCAACTTGTTCAAGAAGAAGAAAGGGAGAAAGGTAAAGTTGGCTTTTCAGTTTATTGGAAATATATCACAGCAGCATATGGAGGAGCACTTGTACCACTCATATTGTTGGCTGAAATTTTGTTTCAACTTCTTCAAATTGGAAGCAATTATTGGATGGCTTGGGCAACTCCTATCTCAACTAATGTTGAGCCACCTGTTGGAGGAAGTAAGCTTATAGTTGTCTATGTAGCTTTGGCCATAGGAAGTTCTGTTTGTGTCCTTGCAAGAGCAACACTTGTAGCCACAGCTGGTTATAAGACAGCTACTTTAGTCTTCAACAACATGCATATCCGCATTTTCCGTGCTCCAATGTCATTTTTTGATTCCACTCCAAGTGGGAGAATCCTTAATAGGGCTTCTACTGACCAAAGTGCAGTGGATATAGACATTCCTCTTCAAACTGGAGCATTGGCTTCCTCTGTGATCCATCTTCTCGGAATTATAGTGGTGATGTCTCAAGTTGCATGGCAGGTTTTCATTGTCTTTATTCCTATTACAGCAATCAGCATCTGGTATCAGCAATATTATTTACCATCAGCCCGGGAACTATCCCGTTTAGTAGGGGTATGCAAGGCTCCTGTGATTCAACACTTTTCTGAAACAATATCAGGTGCATCAACCATCAGGAGCTTTGATCAGGTACCAAGATTTCAGCAAACAAATATTAAAATGATGGATGGATATTCTCGCCCCAAGTTCAACAAAGCTGGTGCTATGGAATGGTTGTGTTTTCGTTTAGATATACTGTCTTCTATGACATTTGCCTTTTGCTTGATATTCTTGATATCTATTCCACAGGGATTCATAGATTCAGGTGTTGCTGGTTTAGCTGTAACCTATGGCCTTAATCTAAACATCATACAATCATGGATGATATGGGATCTTTGCAACTTGGAGACCAAAATTATATCAGTAGAAAGAATACTTCAGTATACTTCCATTCCTAGTGAGCCTCCTCTTGTTGTAGAGGAAAACCAGCCACATGATTCTTGGCCATCATATGGCAGGATTGATATTCACAACTTGCAGGTACGTTATACTCCACGTATGCCATTTGTGTTGCATGGTCTTACATGCACATTTCATGGAGGATTGAAAACTGGAATTGTTGGGAGAACTGGAAGTGGTAAATCAACTCTCATACAAACACTGTTCCGAATTGTCGAGCCTTCTGTTGGGAGAATTATGATTGATGGCATCAACATCTCTTCCATTGGACTTTATGATTTGAGGTCTAGACTGAGTATCATTCCTCAGGATCCAACCATGTTTGAAGGTACTGTGAGAACTAATCTAGACCCACTTGAAGAGTACACAGATGAACAAATTTGGGAGGCCCTTGATAAGTGTCAACTTGGAGATGAAGTTAGAAGGAAAGAAGGAAAGCTAGACTCTTCAGTTTGTGAGAATGGAGAGAATTGGAGTATGGGCCAAAGACAATTGGTTTGTCTTGGTAGGGTGTTGCTTAAGAAGAGTAAGGTCTTGGTGCTAGATGAAGCTACAGCATCTGTTGACACTTCTACAGATAATTTGATTCAGCAAACTCTAAGGCAACACTTCCCTAATTCCTCAGTCATTACCATTGCACATAGAATAACTTCGGTCATTGATAGTGATATGGTTCTACTACTTAATCAAGGACTTATTGAGGAGTATGATTCCCCAACAAGGTTGCTAGAGGACAAGTTATCTTCTTTTGCTCGGCTTGTTGCAGAGTATGCCACAAGGACCAATTCCAGTTTTGACCAACTAAAATAA | 4512 | 0.3956 | MSFVLSLHFLRHFGSSFLTFFVKPIFMHGLSGFLHLLLLVALLVSLVWKKVTVGARESSKEKINNTLFPRTRLCSLVVSAFNLLLFLFNYFCWYRKGLSQEKLVTLLDLVLKVVAWGVGGVCMHDELFISRERRLPFFFRGWCVLYLFVSGYCFIVNIVLYEKHAALPIQCLGSDVSSVCVGLFFCYLGFFVKFEGGVRNSTLQESLLNGDSNDNDVFGTNETKGGDTVTPYSYAGIFSILTFSWVSPLIAGGKKKSLDLEDVPQLDKRDSLIGAFPIFSDKLEAYCGATNTLTTLKLVKSLVFSTWKEIIFTAILALVNTLATFVGPYLIDCFVQYLNGKRQFEKEGLVLVSAFCVAKLVECLTKRHWFFRLQQVGIRMQALLVTIIYNKALNLSCQSKQGQTTGEIINFMSVDAERVGEFSWHLHDLWLVVLQVLVGLLVLYKNLGLASIAGFVAILIVMWANIPLGSTQEKFHNKLMESRDERMKATSEILRNMRILKLQGWEMKFLSKITELRKIEQGCLKKVIYTLVLIISIFWCAPAFVSVVTFGTCMVIGITLESGKILSTLATFQILQEPIYNLPETISMMAQTKVSLDRIASFLRLDEMLSDVVKKLPPGSSDIAIEVVDGNFSWDSFSPNITLQNINLRVFHGMRVAVCGTVGSGKSTLLSCILGEVPKKSGILKVCGTKAYVAQSPWIQSSTIEDNILFGKDMERERYEKVLEACCLKKDLDILSFGDQTIIGERGINLSGGQKQRIQIARALYHDADIYLFDDVFSAVDAHTGSHLFKECLLDLLSSKTVVYVTHQVEFLPAADLILVLKDGKITQCGKYNDLLNSGTDFMELVGAHKEALSALDSLDRGKESDKISTSQQDISVSLSHGAEEKEVKKDAQNGVKDDKCGPKGQLVQEEEREKGKVGFSVYWKYITAAYGGALVPLILLAEILFQLLQIGSNYWMAWATPISTNVEPPVGGSKLIVVYVALAIGSSVCVLARATLVATAGYKTATLVFNNMHIRIFRAPMSFFDSTPSGRILNRASTDQSAVDIDIPLQTGALASSVIHLLGIIVVMSQVAWQVFIVFIPITAISIWYQQYYLPSARELSRLVGVCKAPVIQHFSETISGASTIRSFDQVPRFQQTNIKMMDGYSRPKFNKAGAMEWLCFRLDILSSMTFAFCLIFLISIPQGFIDSGVAGLAVTYGLNLNIIQSWMIWDLCNLETKIISVERILQYTSIPSEPPLVVEENQPHDSWPSYGRIDIHNLQVRYTPRMPFVLHGLTCTFHGGLKTGIVGRTGSGKSTLIQTLFRIVEPSVGRIMIDGINISSIGLYDLRSRLSIIPQDPTMFEGTVRTNLDPLEEYTDEQIWEALDKCQLGDEVRRKEGKLDSSVCENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTSTDNLIQQTLRQHFPNSSVITIAHRITSVIDSDMVLLLNQGLIEEYDSPTRLLEDKLSSFARLVAEYATRTNSSFDQLK | 1503 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma08g03041 | 1503 | Pfam | ABC transporter transmembrane region | 311 | 578 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma08g03041 | 1503 | Pfam | ABC transporter transmembrane region | 938 | 1180 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma08g03041 | 1503 | MobiDBLite | consensus disorder prediction | 880 | 908 | - | - | |
Gma08g03041 | 1503 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1257 | 1489 | IPR003439 | GO:0005524 | |
Gma08g03041 | 1503 | CDD | ABCC_MRP_domain2 | 1253 | 1473 | - | - | |
Gma08g03041 | 1503 | CDD | ABC_6TM_ABCC_D1 | 312 | 599 | IPR044746 | GO:0140359 | |
Gma08g03041 | 1503 | ProSitePatterns | ABC transporters family signature. | 750 | 764 | IPR017871 | GO:0005524 | |
Gma08g03041 | 1503 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 625 | 848 | IPR003439 | GO:0005524 | |
Gma08g03041 | 1503 | Pfam | ABC transporter | 643 | 776 | IPR003439 | GO:0005524 | |
Gma08g03041 | 1503 | Pfam | ABC transporter | 1272 | 1420 | IPR003439 | GO:0005524 | |
Gma08g03041 | 1503 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1245 | 1479 | IPR027417 | - | |
Gma08g03041 | 1503 | PANTHER | MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN | 86 | 1503 | - | - | |
Gma08g03041 | 1503 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 938 | 1218 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma08g03041 | 1503 | SUPERFAMILY | ABC transporter transmembrane region | 936 | 1237 | IPR036640 | GO:0005524|GO:0016021 | |
Gma08g03041 | 1503 | SUPERFAMILY | ABC transporter transmembrane region | 301 | 606 | IPR036640 | GO:0005524|GO:0016021 | |
Gma08g03041 | 1503 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 86 | 1503 | - | - | |
Gma08g03041 | 1503 | Gene3D | - | 1238 | 1491 | IPR027417 | - | |
Gma08g03041 | 1503 | Gene3D | - | 608 | 870 | IPR027417 | - | |
Gma08g03041 | 1503 | Gene3D | ABC transporter type 1, transmembrane domain | 900 | 1236 | IPR036640 | GO:0005524|GO:0016021 | |
Gma08g03041 | 1503 | Gene3D | ABC transporter type 1, transmembrane domain | 289 | 607 | IPR036640 | GO:0005524|GO:0016021 | |
Gma08g03041 | 1503 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 311 | 591 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma08g03041 | 1503 | MobiDBLite | consensus disorder prediction | 865 | 908 | - | - | |
Gma08g03041 | 1503 | CDD | ABCC_MRP_domain1 | 625 | 825 | - | - | |
Gma08g03041 | 1503 | CDD | ABC_6TM_ABCC_D2 | 936 | 1230 | IPR044726 | GO:0140359 | |
Gma08g03041 | 1503 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 622 | 847 | IPR027417 | - | |
Gma08g03041 | 1503 | SMART | AAA_5 | 652 | 825 | IPR003593 | - | |
Gma08g03041 | 1503 | SMART | AAA_5 | 1281 | 1466 | IPR003593 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma08g03041 | Gma-Chr8 | 47021628 | 47030493 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma08g03041 | 625 | 876 | Calmodulin-binding Proteins | AT2G36910 | 29.779 | 3.30e-25 | 112 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma08g03041 | - | K05666 | gmx:100775358 | 2865.87 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma08g03041 | 08 | 47021628 | 47030493 | Gma08g03041 | 08 | 47021628 | 47030493 | ECH |