Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03037 ATGGACGCCGGCGAAGCCCTCTCCGACGATCCGAATCGGCCCAATTCCGCCGCCGACGCAGCTCCGGCCCCCGCGGGAGCAAGGTACAAGCTCCTGTCGCCGGCTAAGCTCCCGATCTCCCGCTCCCCGTGCGTCACGATTTCGCCGGGGCTCAGTCCGACGTCGTTTCTCGAGTCGCCGGTGCTGCTCTCCAACATGAAGGTGGAACCTTCACCGACTACAGGGTCGCTTTCTTTGCTTCATCAAACAGCATATGGTTCCATGACTTCTGCTGCATCTGCTACATTTCCTGTAACCACTGTGTGCTTCAATAGCAATACCGTTGATGAGAGAAAACCTAGCTTCTTTGAGTTTAAACCACACAGTGGATCAAATATGGTTCCCGCAGACTTTGACAACCATGCAAGTGAAAAATCTACTCAAATAGACAGTCAAGGAAAAGCTCAAGCTTTTGATTCATCAGCCTTAGTAAAAAATGAGTCAGCATCCCCTTCAAATGAATTAAGTCTATCATCGCCTGTTCAAATGGATTGCTCAGGAGCTAGTGCCCGTGTTGAAGGTGATTTGGATGAATTGAACCCTAGGAGCAACATAACAACTGGGCTTCAAGCATCACAAGTTGACAATAGAGGTAGTGGACTTACCGTTGCAGCTGAGCGAGTATCTGATGATGGATACAACTGGAGAAAATATGGGCAAAAACATGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCTAACTGTGAAGTTAAGAAACTATTTGAACGCTCCCATGATGGACAAATCACTGAGATAATTTACAAGGGAACACATGATCATCCTAAACCTCAACCAAACCGCCGTTACTCTGCAGGAACTATAATGTCTGTGCAAGAAGACAGATCTGATAAAGCTTCTTTGACTAGCCGAGATGACAAAGGATCCAATATGTGTGGCCAGGGGTCTCACCTGGCTGAGCCCGACGGTAAACCAGAGTTATTGCCTGTAGCAACAAATGATGGTGATCTAGATGGTTTGGGGGTTTTGTCAAACCGGAATAATGATGAGGTTGATGATGATGATCCCTTCTCAAAGCGAAGAAAAATGGACGTTGGAATTGCTGACATCACTCCTGTAGTTAAGCCTATCCGGGAGCCACGTGTTGTTGTACAAACTCTGAGTGAGGTTGATATCTTGGATGATGGCTATCGCTGGCGCAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACGAACACCGGTTGCCCCGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCAAAAGCTGTGATTACCACGTATGAGGGGAAACACAATCATGATGTACCAACTGCAAGGAATAGTTGCCATGACATGGCAGGACCAGCAAGTGCAAGTGGACAGACAAGAGTTAGGCCCGAAGAAAGTGATACCATCAGCCTTGACCTTGGGATGGGAATTAGCCCAGCTGCCGAAAACACATCAAACAGTCAAGGGAGAATGATGCTTTCTGAATTTGGGGATAGTCAAATTCACACCAGCAATTCCAATTTCAAGTTCGTTCATACCACGACCGCGCCGGGGTACTTTGGTGTTCTAAATAACAACTCTAACCCATATGGTTCTAAAGAAAATCCAAGTGATGGTCCATCTTTAAACCATTCTGCTTATCCTTGCCCTCAGAACATAGGGAGAATACTAATGGGTCCTTGA 1734 0.466 MDAGEALSDDPNRPNSAADAAPAPAGARYKLLSPAKLPISRSPCVTISPGLSPTSFLESPVLLSNMKVEPSPTTGSLSLLHQTAYGSMTSAASATFPVTTVCFNSNTVDERKPSFFEFKPHSGSNMVPADFDNHASEKSTQIDSQGKAQAFDSSALVKNESASPSNELSLSSPVQMDCSGASARVEGDLDELNPRSNITTGLQASQVDNRGSGLTVAAERVSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPNRRYSAGTIMSVQEDRSDKASLTSRDDKGSNMCGQGSHLAEPDGKPELLPVATNDGDLDGLGVLSNRNNDEVDDDDPFSKRRKMDVGIADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNTGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNSCHDMAGPASASGQTRVRPEESDTISLDLGMGISPAAENTSNSQGRMMLSEFGDSQIHTSNSNFKFVHTTTAPGYFGVLNNNSNPYGSKENPSDGPSLNHSAYPCPQNIGRILMGP 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03037 577 MobiDBLite consensus disorder prediction 343 362 - -
Gma08g03037 577 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 557 IPR044810 GO:0003700
Gma08g03037 577 MobiDBLite consensus disorder prediction 134 174 - -
Gma08g03037 577 MobiDBLite consensus disorder prediction 1 24 - -
Gma08g03037 577 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 14 557 - -
Gma08g03037 577 SUPERFAMILY WRKY DNA-binding domain 219 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma08g03037 577 MobiDBLite consensus disorder prediction 295 328 - -
Gma08g03037 577 Gene3D WRKY domain 382 458 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma08g03037 577 Gene3D WRKY domain 213 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma08g03037 577 ProSiteProfiles WRKY domain profile. 392 457 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g03037 577 MobiDBLite consensus disorder prediction 544 565 - -
Gma08g03037 577 SUPERFAMILY WRKY DNA-binding domain 389 457 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma08g03037 577 Pfam WRKY DNA -binding domain 223 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g03037 577 Pfam WRKY DNA -binding domain 398 454 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g03037 577 ProSiteProfiles WRKY domain profile. 217 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g03037 577 SMART WRKY_cls 222 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g03037 577 SMART WRKY_cls 397 456 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g03037 577 MobiDBLite consensus disorder prediction 127 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03037 Gma-Chr8 46958315 46964293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03037 32 577 WRKY Transcription Factor Family AT4G26640 55.856 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma08g03037 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03037 - - gmx:100127383 1146.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03037 08 46958315 46964293 Gma08g03037 08 46958315 46964293 ECH
Gma18g00742 18 7883446 7888755 Gma08g03037 08 46958315 46964293 GST
Gma08g03037 08 46958315 46964293 Gma14g00148 14 1188585 1194130 PCT
Gma08g03037 08 46958315 46964293 Gma02g02789 02 53493181 53498538 PCT
Gma14g00148 14 1188585 1194130 Gma08g03037 08 46958315 46964293 PCT
Gma02g02789 02 53493181 53498538 Gma08g03037 08 46958315 46964293 PCT