Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03035 ATGATGCCGAGTGTTAAGCCTGATGCATCTGACAAAGACTCAGAACCATTTGTTGAAGTTGATCCAACAAGAAGATATGGAAGATACAGTGAACTATTAGGATATGGTGCTGTGAAAAAGGTGTATAGGGCATTTGATCAAGAAGAGGGAATAGAGGTGGCATGGAACCAAGTGAAGCTGAGGAACTTCAGTTATGACCCTTCCATGGTGGATAGGCTTTACTCTGAAGTGAGGTTGCTAAGAAGCTTGACCAACAAAAACATCATTTCCCTTTACAGTGTTTGGAGGGAGGAGAAACACAACACCTTGAACTTCATCACTGAGGTCTGCACCAGTGGGAATCTGAGGGAGTACAGGAAGAAGCACAAGCATGTGTCCATGAGGGCCTTGAAAAAGTGGTCCAAGCAGATCTTGGAAGGGCTGAATTACTTGCATTTGCATGATCCTTGTATCATCCACAGAGACCTCAACTGCAGTAATGTGTTTGTGAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGCTTGGCAGCAATTGTGGGGAAGAACCACTCTGCACATTCAATTCTTGGGACACCAGAATTCATGGCACCTGAGTTGTATGAAGAGGACTACACTGAAATGGTTGACATATACTCATTTGGAATGTGTGTGCTAGAGATGGTGACACTAGAGATTCCATATAATGAGTGTGACAGTGTTGCCAAGATATACAAGAAAGTGTCATCAGGTGTGAGGCCACAGGCCTTGAACAAGATCAAAGatgctgaggtgaaggccttcgttgagaggtgccttgctcaaccaagggctaggccttctgctgctgagttgctcaaggaccccttcttTGATGTGCTTGATTGTGACGAAAATGATGATTCTAATGCTTCATGA 900 0.3922 MMPSVKPDASDKDSEPFVEVDPTRRYGRYSELLGYGAVKKVYRAFDQEEGIEVAWNQVKLRNFSYDPSMVDRLYSEVRLLRSLTNKNIISLYSVWREEKHNTLNFITEVCTSGNLREYRKKHKHVSMRALKKWSKQILEGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHSAHSILGTPEFMAPELYEEDYTEMVDIYSFGMCVLEMVTLEIPYNECDSVAKIYKKVSSGVRPQALNKIKDAEVKAFVERCLAQPRARPSAAELLKDPFFDVLDCDENDDSNAS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03035 299 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 297 - -
Gma08g03035 299 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03035 299 CDD STKc_WNK 25 285 - -
Gma08g03035 299 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Gma08g03035 299 SUPERFAMILY Protein kinase-like (PK-like) 20 286 IPR011009 -
Gma08g03035 299 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g03035 299 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 297 - -
Gma08g03035 299 Gene3D Transferase(Phosphotransferase) domain 1 110 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03035 Gma-Chr8 46933169 46935339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03035 11 286 MAP Kinase Kinase Kinase AT5G55560 84.058 0.0 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma08g03035 Pkinase 2.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03035 K08867 - gmx:100818126 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03035 08 46933169 46935339 Gma08g03035 08 46933169 46935339 ECH
Gma18g00744 18 7918480 7920432 Gma08g03035 08 46933169 46935339 GST
Gma08g03035 08 46933169 46935339 Gma14g00150 14 1212427 1215734 PCT
Gma08g03035 08 46933169 46935339 Gma02g02787 02 53476825 53479528 PCT
Gma14g00150 14 1212427 1215734 Gma08g03035 08 46933169 46935339 PCT
Gma02g02787 02 53476825 53479528 Gma08g03035 08 46933169 46935339 PCT