Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03029 atggGTATCTCTCGTGATTCCATGCACAAGAGGCGCGCCACCGGCGGCAAGAAGAAGTCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGGAGGCAGCCAGCAAACACAAAGCTATCAAGCAACAAGACGGTGAGGAGGATTAGGGTTCGCGGTGGAAACGTGAAGTGGCGTGCTTTGAGGCTTGATACCGGGAACTACTCTTGGGGGAGTGAGGCTGTGACCCGCAAGACAAGGATTCTTGATGTTGTGTACAATGCATCCAACAATGAGCTTGTTCGGACTCAGACGCTGGTCAAGAGTGCCATTGTTCAGGTCGATGCAGCGCCCTTCAAGCAGTGGTATCTGCAGCATTATGGCGTTGAGGTTGGCCGCAAGAAGAAGAGTGCAGCAGCTTCTGTCAAGAAGGAAGGGGAGgatggtgaagctgcaactgaggaggtgaagaagagtaaccatgttgtgagaaaattggaAAAGCGAAAGCAGAACCGGGTGCTTGATCCTCACATTGAAGAACAATTTGGAGGTGGTCGCCTTTTGGCTTGTATCTCATCTCGACCTGGCCAATGTGGCCGTGCTGATGGATATATATTAGAGGGCAAAGAGCTGGAATTTTACATGAAGAAGCTTCAGAAGAAGAAGGGCAAGGGTGCTGCTTAA 660 0.4591 MGISRDSMHKRRATGGKKKSWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEVGRKKKSAAASVKKEGEDGEAATEEVKKSNHVVRKLEKRKQNRVLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03029 219 MobiDBLite consensus disorder prediction 1 35 - -
Gma08g03029 219 Gene3D - 163 216 - -
Gma08g03029 219 Gene3D - 32 162 - -
Gma08g03029 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 219 - -
Gma08g03029 219 Pfam Ribosomal protein S8e 5 198 IPR022309 -
Gma08g03029 219 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Gma08g03029 219 MobiDBLite consensus disorder prediction 11 26 - -
Gma08g03029 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 219 IPR001047 GO:0003735|GO:0005840|GO:0006412
Gma08g03029 219 TIGRFAM eS8: ribosomal protein eS8 1 200 IPR001047 GO:0003735|GO:0005840|GO:0006412
Gma08g03029 219 CDD Ribosomal_S8e_like 5 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03029 Gma-Chr8 46868875 46872157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03029 1 207 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.575 2.02e-126 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03029 K02995 - gmx:100803006 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03029 08 46868875 46872157 Gma08g03029 08 46868875 46872157 ECH