Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03026 ATGCCACAAAGAAAAGGTTGCAGTTCTCTGAATGAGCCTCGTCTTGTTGCCAGGAAATTCTTGGCACGACCTCAGATTGAGGGTGTTGGGACTGTTGTTAGAAGAAGCATAGGAGGGTTTGAGCTCAAGTATTTTGATCCCTTCATTGTCTTGGATGAATTCTCAGTTACTGCTCCTGCTGGTTTTCCTGATCATCCCCATAGAGGTTTCAAAATTGGCCTTTTCTTTCTCATTCTATTTTCTATAATGCATGAAGATTTTGAAGGACATAAGGGGACAATAGAAGCTGGTGACTTGCAATGGATGACTGCAGGGAGAGGGATTGTTCACTCAGAAATGCCTGCGGCTCAAGGCACCCAAAAGGGTCTACAATTGTGGATCAACTTGGCTTCCAAATATAAAATGATTGAACCAAGGTATCAAGAAGTGTTGAGTAAGGACATAGCAGAAGCTGAGGATGATGGTATCAAGGTTAGAGTTATAGCTGGGGAAGCACTAGGGATAAAGTCTCCAATCTACACAAGGACACCAACCATGTTCTTGGACTTCTCTCTCAAACCTGGAGGTCACTTGCAACAACCTATACCAAATTCTTGGAATGCTTTTGTCTATATATTGGAAGGAGAGGGTATATTTGGAAACATGATATCTCAGCCTTCAAACTCTCACCATATTCTTCTTCTTGGTCCTGGGGATGGCCTAGAGGCATGGAACAAATCTTCTAAGCTCCTTAGGTTCATTTTGGTTGGAGCAGAACCCTTGGGGGAACCTCTAGTGCAATTTGGACCCTTTGTCATGAATTCACAAGAAGAGATTGATCAAACCATTGATGATTTTGAGAACTTTGCCAACGGATTTGAAAAGGCAAGACATTGGACATCTGAAAGCCAAATTAATTAA 900 0.4211 MPQRKGCSSLNEPRLVARKFLARPQIEGVGTVVRRSIGGFELKYFDPFIVLDEFSVTAPAGFPDHPHRGFKIGLFFLILFSIMHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLASKYKMIEPRYQEVLSKDIAEAEDDGIKVRVIAGEALGIKSPIYTRTPTMFLDFSLKPGGHLQQPIPNSWNAFVYILEGEGIFGNMISQPSNSHHILLLGPGDGLEAWNKSSKLLRFILVGAEPLGEPLVQFGPFVMNSQEEIDQTIDDFENFANGFEKARHWTSESQIN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03026 299 CDD cupin_pirin_C 177 253 - -
Gma08g03026 299 PIRSF Pirin 12 293 IPR012093 -
Gma08g03026 299 Pfam Pirin C-terminal cupin domain 180 284 IPR008778 -
Gma08g03026 299 Gene3D Jelly Rolls 27 280 IPR014710 -
Gma08g03026 299 Pfam Pirin 33 127 IPR003829 -
Gma08g03026 299 CDD cupin_pirin_N 33 129 - -
Gma08g03026 299 SUPERFAMILY RmlC-like cupins 14 294 IPR011051 -
Gma08g03026 299 PANTHER PIRIN-RELATED 4 298 IPR012093 -
Gma08g03026 299 PANTHER OS09G0484800 PROTEIN 4 298 - -
Gma08g03026 299 Gene3D Jelly Rolls 149 254 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03026 Gma-Chr8 46850059 46853561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03026 13 290 Calmodulin-binding Proteins AT3G59220 56.786 5.60e-117 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03026 K06911 - gmx:100802484 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03026 08 46850059 46853561 Gma08g03026 08 46850059 46853561 ECH
Gma18g00757 18 8128859 8138237 Gma08g03026 08 46850059 46853561 GST
Gma08g03026 08 46850059 46853561 Gma14g00156 14 1255156 1258263 PCT
Gma08g03026 08 46850059 46853561 Gma02g02781 02 53423139 53434635 PCT
Gma14g00156 14 1255156 1258263 Gma08g03026 08 46850059 46853561 PCT
Gma02g02781 02 53423139 53434635 Gma08g03026 08 46850059 46853561 PCT