Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03014 ATGGCGATGCTTCCCCTCACAAACCCTACTCCAATTCGCCACAATGCATTGTCTTCCTCCTCTTTCGTTCAAAGAAAATGTGTCTCTCTGATCCCTAGAATCAGAACATGCGACTCCGAACCCCAGCGACGTCGTTTTGCGTCCGTGACATGCTGCTCCTTCTCGACACTCGACAGTGCTAAGATTAAGGTTGTCGGAGTTGGGGGCGGCGGGAACAATGCTGTTAACCGCATGATTGGTTGCGGATTGCACGGTGTAGAATTTTATGCTATAAATACTGATGCCCAAGCACTGTTGCATTCTTCTGCTGAGAACCCTATCAAAATTGGAGAGCTTCTGACTCGTGGATTAGGTACTGGAGGGAATCCGCTTTTGGGGGAACAAGCTGCTGAGGAATCAAAAGAAGCTATTGCTAATGCTCTTCAAGGCTCGGATTTAGTGTTTGTAACTGCTGGCATGGGTGGGGGAACTGGGTCTGGTGCTGCCCCCGTAGTGGCCCGAATAGCGAAAGAAGCAGGTTACTTGACTGTAGGTGTTGTCACCTATCCCTTTAGTTTCGAAGGGCGCAAAAGATCATTGCAGgcattggaagccattgaaaagctgcagaaaaatgtggatacacttatagtgattccaaatgaccgcctgcttgacatGGCTGATGAGCAGACACCTCTTCAAGATGCTTTCCGTCTAGCAGATGACGTTCTACGACAAGGAGTACAGGGAATATCAGACATCATAACAATACCCGGGCTTGTAAATGTGGATTTTGCTGATGTAAAAGCTGTGATGAAAGACTCTGGAACTGCTATGCTTGGTGTGGGTGTTTCCTCCAGTAAAAACCGTGCAGAAGAAGCTGCAGAACAGGCCACTTTGGCTCCTTTAATTGGCTCATCTATTCAGTCAGCTACTGGGGTAGTGTATAACATTACTGGAGGAAAAGACATAACTCTACAGGAAGTGAACAGAGTGTCTCAGGTTGTGACTAGTTTAGCCGACCCTTCTGCCAATATTATATTTGGCGCCGTTGTTGACGATCGCTACAATGGGGAGATTCATGTGACTATCATTGCAACTGGCTTCTCACAGTCCTTCCAGAAGATACTACTAACAGATCCTAGGGCAGCAAAGTTGCTTGACAGAGAGCCTGGGGGCCAAGAAAGCAAGGCTGCATCTCCTCCTCTCAAGTCCTCAAACTATCCTTCAACGGAGTGTGATGAAAAAAGAAGGGAGAAAAAGGGGTGGGGTGTTGTGAGAAAGGATGGTGAGGGAATAAGGGAAAGGATTGGGGGTGTAGGAGAGCGAGGAGGGTATAGGGGGACAATTTACATTTCTGGAGGTGAAAATAGCACTTTAGAGAGCACCCTGAGATCTCTGCTTCAGAGTTCAGAGGTAACAAACAAACTGCATTTTTCCAACGTTTTTTTTTTCCCTTGTATTTTCACTTTCTTTCTCTTTCCACCATTTTCTCGGCAACCAAACACCCCAATCAATCAATAA 1506 0.4436 MAMLPLTNPTPIRHNALSSSSFVQRKCVSLIPRIRTCDSEPQRRRFASVTCCSFSTLDSAKIKVVGVGGGGNNAVNRMIGCGLHGVEFYAINTDAQALLHSSAENPIKIGELLTRGLGTGGNPLLGEQAAEESKEAIANALQGSDLVFVTAGMGGGTGSGAAPVVARIAKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDMADEQTPLQDAFRLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKILLTDPRAAKLLDREPGGQESKAASPPLKSSNYPSTECDEKRREKKGWGVVRKDGEGIRERIGGVGERGGYRGTIYISGGENSTLESTLRSLLQSSEVTNKLHFSNVFFFPCIFTFFLFPPFSRQPNTPINQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03014 501 SMART Tubulin_4 61 253 IPR003008 GO:0005525
Gma08g03014 501 ProSitePatterns FtsZ protein signature 1. 92 126 IPR020805 GO:0005525
Gma08g03014 501 Gene3D Tubulin/FtsZ, GTPase domain 54 268 IPR036525 -
Gma08g03014 501 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 3 402 - -
Gma08g03014 501 SMART Tubulin_C_4 255 372 IPR018316 -
Gma08g03014 501 Gene3D - 269 373 IPR037103 -
Gma08g03014 501 ProSitePatterns FtsZ protein signature 2. 145 166 IPR020805 GO:0005525
Gma08g03014 501 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 3 402 IPR045061 GO:0003924|GO:0005525
Gma08g03014 501 CDD FtsZ_type1 77 362 IPR000158 GO:0003924|GO:0005525
Gma08g03014 501 Hamap Cell division protein FtsZ [ftsZ]. 57 432 IPR000158 GO:0003924|GO:0005525
Gma08g03014 501 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 154 160 IPR017975 GO:0005525|GO:0005874|GO:0007017
Gma08g03014 501 MobiDBLite consensus disorder prediction 383 414 - -
Gma08g03014 501 SUPERFAMILY Tubulin C-terminal domain-like 255 369 IPR008280 -
Gma08g03014 501 PRINTS Cell division protein FtsZ signature 146 166 IPR003008 GO:0005525
Gma08g03014 501 PRINTS Cell division protein FtsZ signature 260 281 IPR003008 GO:0005525
Gma08g03014 501 PRINTS Cell division protein FtsZ signature 237 259 IPR003008 GO:0005525
Gma08g03014 501 PRINTS Cell division protein FtsZ signature 174 195 IPR003008 GO:0005525
Gma08g03014 501 TIGRFAM ftsZ: cell division protein FtsZ 58 368 IPR000158 GO:0003924|GO:0005525
Gma08g03014 501 Pfam FtsZ family, C-terminal domain 270 363 IPR024757 -
Gma08g03014 501 Pfam Tubulin/FtsZ family, GTPase domain 61 221 IPR003008 GO:0005525
Gma08g03014 501 SUPERFAMILY Tubulin nucleotide-binding domain-like 60 256 IPR036525 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03014 Gma-Chr8 46710838 46717598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03014 149 278 PP2C-type Phosphatase Gene Family AT1G75010 27.143 7.62e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03014 K03531 - gmx:100809043 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03014 08 46710838 46717598 Gma08g03014 08 46710838 46717598 ECH
Gma18g00771 18 8570565 8573157 Gma08g03014 08 46710838 46717598 GST