Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g03012 ATGGCATCTTCAGACTCATGGATGAAGGAATATAATGAAGCTGTGAAACTTGCTGATGATATCAATGGCATGATTTCTGAACGTAGTTCGTTTCCTGCATCTGGACCAGAAACCCAGCGACATGCTTCTGCTATAAGAAGGAAGATCACGATATTAGGGACCAGACTTGATAGCTTGCAATCTCTGTTGTCAAAGGTCCCTGCAAAAACTGAGAAGGAGATGAATCGTCGAAAGGACATGCTTGCAAATTTGAGGACAAAAGTTAACCAAATGGCTTCAACATTGAACATGTCTAACTTTGCAAATAGGGATAGTTTGCTAGGGCCAGAAATAAAATCAGATGCAATGAGCAGAACTGTTGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAACATATTGCATTGGCTGTGAATGAAGAGCTGAATCTACATACCAGACTCATTGATGACTTGGACCAACATGTAGATGTTACAGATTCTCGGCTGAGGAGAGTGCAGAAGAACTTGGCAGTGTTAAACAAACGTACCAAGGGTGGTTGCTCCTGCTTGTGCATGCTTTTATCAGTGATTGGTATAGTGGGTTTGGTGGTTGTCATATGGCTGTTGGTCAAATATTTGTAA 687 0.4192 MASSDSWMKEYNEAVKLADDINGMISERSSFPASGPETQRHASAIRRKITILGTRLDSLQSLLSKVPAKTEKEMNRRKDMLANLRTKVNQMASTLNMSNFANRDSLLGPEIKSDAMSRTVGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELNLHTRLIDDLDQHVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLSVIGIVGLVVVIWLLVKYL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g03012 228 SUPERFAMILY SNARE fusion complex 123 193 - -
Gma08g03012 228 Gene3D - 134 196 - -
Gma08g03012 228 PANTHER SYNTAXIN 1 223 IPR045242 -
Gma08g03012 228 Pfam SNARE domain 169 220 IPR000727 -
Gma08g03012 228 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 132 194 IPR000727 -
Gma08g03012 228 SMART tSNARE_6 127 194 IPR000727 -
Gma08g03012 228 CDD SNARE_Qc 135 192 - -
Gma08g03012 228 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g03012 Gma-Chr8 46695856 46700504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g03012 2 228 SNARE and Associated Proteins AT1G16240 72.609 1.17e-123 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g03012 K08503 - gmx:100799465 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03012 08 46695856 46700504 Gma08g03012 08 46695856 46700504 ECH
Gma18g00773 18 8586679 8591412 Gma08g03012 08 46695856 46700504 GST
Gma08g03012 08 46695856 46700504 Gma14g00162 14 1299722 1302149 PCT
Gma14g00162 14 1299722 1302149 Gma08g03012 08 46695856 46700504 PCT