Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02993 ATGTATAAAAAATTAACTAGCAAAATGGAAGCTACCTGCAATGATATCTCTAATGTTGCAGTTACACAGTCTTCTCCAACGATGTCGTTTAATGGGAAACGACTTGTCGTGGATGAGATAGATTTCTTCGCAGAGAAGAAGAAGAAGAAGAAAAGTGAAGTTGATGATCAAATGGTGCATCACCAAATGGAGCTTCCTAATACTAGTTTAGATCTCCTTATTACAAATAGTACTTCAACGAGCAATAGATCAAATATGGAAGAAGAACTGTCCGAGGCAAAGGATAATACCAGAAATAAGTTTGTAGCTATGCTATCTGAGTTGCAGGAGATGAATGCTGAAAATCAACGCTTGAGAGAGCTGGTTCATAATCTGAATAATAAGTACAATGCCCTGCACAAGGATCTTATGAAACTTACGCATAAACAACATGAAAATGAGATTAATGGAGCCATAAAGGAGAATGATAAGAGAGATGATATGATTATTCCAAGGTCTTTGTTGGATATTGGAATTGCTACAAAGGAAGATCCTTCACAGCAACATTATTCAGAACGAAAACTGCAAGAAAGCAAAAACATTATTGACAAGTTGGATTCTGGAAAGGATAGTGAAAAATCTATGGTAGATCAGCATGAGAGTCCAGCTGATCACAAAGCTCTTTGGGGGTGGATCTCAACTGAAGCAACAAGATTGAGTTCTTTGAGGGATGTTGATCAAGCATCAGAAACCATGTCAATGATCAAGAAAGCTCGTGTATCAGTTCGTGCAAGAACAGATTCATCTATGATATCAGATGGATGTCAATGGAGAAAGTATGGACAGAAGATGGCAAAAGGGAATCCATGTCCGCGATCTTATTATCGTTGCTCAATGGGGACTGCTTGTCCAGTTCGGAAGCAAGTACAAAGGAGTGCTGAGGATCAAAGTGTATTGATCACAACATATGAAGGACAGCATAATCATGTACTCCCTCCCACTGCCAAGGCAATGGCATCCACCACATCAGCAGTTACATCAATGCTTCTTTCAGGATCAATGCTAAGCTCAGATGGCCTTATTCACCCAAACATATTGGAAAGTACTGCAGCACTTTCATGCTCACAGAACACAGCAGCAACCCTCTCAGCTTCAGCTCCATTTCCAACAATAACTTTGGATCTCACTCAAAGTGCTACCAATAATTCCTCACAGCTACTACAAGGAGCACCACAAGATAACCAACATAGCCTCCTTTCCCCAGTTTTGGCTCAGAAGTTTATGTCATCAGCTACAAACATTTTTGACCAGGGAACAGAAACTGCTTCATTTGTGGACACGGTAAATGCAGCAACAGCTGCTATCACTGCGGACCCGAAATTCAGTGCAGCTCTTATGGCTGCCATAACATCTATTATTGGAGGTTCACATTCAAACATTAATGGTACTAGTGGAGATATCCAACATGGCAATAACAATTAA 1461 0.4011 MYKKLTSKMEATCNDISNVAVTQSSPTMSFNGKRLVVDEIDFFAEKKKKKKSEVDDQMVHHQMELPNTSLDLLITNSTSTSNRSNMEEELSEAKDNTRNKFVAMLSELQEMNAENQRLRELVHNLNNKYNALHKDLMKLTHKQHENEINGAIKENDKRDDMIIPRSLLDIGIATKEDPSQQHYSERKLQESKNIIDKLDSGKDSEKSMVDQHESPADHKALWGWISTEATRLSSLRDVDQASETMSMIKKARVSVRARTDSSMISDGCQWRKYGQKMAKGNPCPRSYYRCSMGTACPVRKQVQRSAEDQSVLITTYEGQHNHVLPPTAKAMASTTSAVTSMLLSGSMLSSDGLIHPNILESTAALSCSQNTAATLSASAPFPTITLDLTQSATNNSSQLLQGAPQDNQHSLLSPVLAQKFMSSATNIFDQGTETASFVDTVNAATAAITADPKFSAALMAAITSIIGGSHSNINGTSGDIQHGNNN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02993 486 ProSiteProfiles WRKY domain profile. 259 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g02993 486 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 21 473 - -
Gma08g02993 486 SMART WRKY_cls 264 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g02993 486 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 21 473 IPR044810 GO:0003700
Gma08g02993 486 SUPERFAMILY WRKY DNA-binding domain 257 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma08g02993 486 Coils Coil 76 142 - -
Gma08g02993 486 Pfam WRKY DNA -binding domain 266 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma08g02993 486 Gene3D WRKY domain 249 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02993 Gma-Chr8 46489460 46494522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02993 34 470 WRKY Transcription Factor Family AT1G62300 40.377 2.24e-90 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma08g02993 WRKY 3.2e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00796 18 8940205 8943947 Gma08g02993 08 46489460 46494522 GST
Gma08g02993 08 46489460 46494522 Gma02g02755 02 53185354 53187654 PCT
Gma02g02755 02 53185354 53187654 Gma08g02993 08 46489460 46494522 PCT