Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02989 ATGTCGAATTTGCCCCAATCGCTGTCGATGGGCGCGGCCTTCGGCGGAGGCGGCGCTCCGCCTCAGCCATCGAGTGTCGGCGGCGGAGCACAGGGTTCCGGCGCTGGCAAGGATCGGAAGATGGCGTCGGCGGAGCAGCTCGTGCTGGAACTCAGCAACCCTGAGCTCCGTGAAAACGCGCTTCTCGAACTCTCCAAGAAGAGGGAGCTATTTCAAGATCTTGCTCCATTGCTATGGAATTCTTTTGGTACAATTGCTGCACTTTTGCAGGAAATAGTTTCAATATACCCTGTTCTTTCACCACCAAATCTTACTCCTGCACAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTAGCATCTCACCCTGATACAAGGATGCTATTCCTCAATGCTCATATACCTTTATATCTGTATCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTACTTGAGGCTTACCAGTCTTGGTGTAATTGGTGCATTGGTGAAGGTTGATGATACAGAAGTTATAAGTTTCCTTCTTTCAACAGAGATAATTCCCCTGTGCCTGCGCACCATGGAAATGGGCAGTGAACTATCCAAAACAGTTGCAACATTTATTGTTCAAAAAATTCTGTTGGACGATGTGGGCTTGGACTATATTTGTACTACAGCGGAGCGCTTTTTCGCAGTAGGTCGAGTTCTGGGGAACATGGTGGCAGCTCTCGCTGAGCAACCCTCATCTCGTCTATTGAAGCATATCATTCGATGCTATCTTCGCCTATCAGATAATCCAAGGGCTTGTGATGCATTAAGAAGCTGTCTACCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGTGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGAGGGAATCGGGTTCCTGCACTACAAGCTGGAGGAGGTTTCGATCATATGATTGTGACCTGA 978 0.4765 MSNLPQSLSMGAAFGGGGAPPQPSSVGGGAQGSGAGKDRKMASAEQLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSTCLREDPTTRRWLQQLLHNVGGNRVPALQAGGGFDHMIVT 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02989 325 Pfam Cell differentiation family, Rcd1-like 47 305 - -
Gma08g02989 325 PANTHER UNCHARACTERIZED 1 323 - -
Gma08g02989 325 PANTHER BNAA05G20110D PROTEIN 1 323 - -
Gma08g02989 325 SUPERFAMILY ARM repeat 49 212 IPR016024 -
Gma08g02989 325 Gene3D - 36 306 IPR011989 -
Gma08g02989 325 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02989 Gma-Chr8 46459695 46468441 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Gma08g02989 Rcd1 5.7e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02989 K12606 - gmx:100792784 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00801 18 9003526 9011703 Gma08g02989 08 46459695 46468441 GST
Gma08g02989 08 46459695 46468441 Gma14g00185 14 1562722 1567152 PCT
Gma08g02989 08 46459695 46468441 Gma02g02752 02 53164568 53168661 PCT
Gma14g00185 14 1562722 1567152 Gma08g02989 08 46459695 46468441 PCT
Gma02g02752 02 53164568 53168661 Gma08g02989 08 46459695 46468441 PCT