Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02982 ATGTCAATGTTCAGAACTTTGAATCAGGAGGGTGGTGATCATCAAATACATTGCTCTAGAGAAAGAAGTAGAACAGCTTGGAAGATCATTCAAGAGTATTTGATGCCATTTGTGGAGAAAGAAAAATACCACATCTCAAAAAGGTGTATGCTTCACCCTGACAATGACATATACAGAGATCAGGAGCAACATAAGTCTCATATAGATATAAACGAATGGCAGTGTAGGTACTGTAAGAAAAGTTTCTATGAAGAGAAACATCTTGATCAGCATTTTGACAACAGACACTCCAATTTGCTTAATTTGAGTGAAAGCCAGTGCTTAGCAGATGTTTGTGGTGCTCTGCACTGTGACCATGAAATGAATTCTGGATCTAAAAAATCAAAGTGCAATCCTGCTGCTGCTGCAAAACATAAACATCTATGTGAGAGCTTAGCCGATAGTTGTTTTCCTGTCAGTGATGGCCCTGCAGCAAGCCAACTTCATGAATTCTTCTTGCACCAATTCTGTGATGCACACAGCTGCACTGGAAGTAGGAAACCTTTCTCCAGAGGGCACAGGAAGAAGACAAATGTGTTCTACATCTTTGTGTCTATTTTGCTTGTGATACTGCTGCTACTATACTATCTCTACATTTACTTATATCAGAGAGGAATGAAAAGAGAAACTCAAGTGCTGAAGCGCATCTCACAAGCCAGCAGAAAGAAAAAGCCATCTTAA 720 0.3958 MSMFRTLNQEGGDHQIHCSRERSRTAWKIIQEYLMPFVEKEKYHISKRCMLHPDNDIYRDQEQHKSHIDINEWQCRYCKKSFYEEKHLDQHFDNRHSNLLNLSESQCLADVCGALHCDHEMNSGSKKSKCNPAAAAKHKHLCESLADSCFPVSDGPAASQLHEFFLHQFCDAHSCTGSRKPFSRGHRKKTNVFYIFVSILLVILLLLYYLYIYLYQRGMKRETQVLKRISQASRKKKPS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02982 239 ProSiteProfiles Zinc finger C2H2 type domain profile. 73 98 IPR013087 -
Gma08g02982 239 PANTHER ZINC FINGER PROTEIN-RELATED 4 239 - -
Gma08g02982 239 SUPERFAMILY Expressed protein At2g23090/F21P24.15 63 98 - -
Gma08g02982 239 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 239 - -
Gma08g02982 239 ProSitePatterns Zinc finger C2H2 type domain signature. 75 96 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02982 Gma-Chr8 46383977 46387995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02982 5 239 C2H2 Transcription Factor Family AT5G63280 60.924 4.70e-105 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02982 - - gmx:100792257 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00819 18 9412110 9416318 Gma08g02982 08 46383977 46387995 GST