Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02970 ATGCGTAAACCCATCTTCACGTTCTTCATACATATCTTTCTTGTTTGCTTCCCAAGTCTCTCGAAGCATCTTTCTTTCTCTTCCTGCAGAAGCTATCCGTGTTACTTGTTCCCAAGTCTCCAACAAGCAAAGTACATGGTTGATTTGGAAATCCAGGTCCCCAGCGCATTCGACCCGTTTGCCGAGGCGAGAGAATCAGATGCCCCCGGGGCAAAGGAGTATGTGCACATACGAATTCAGCAGAGGAATGGAAAGAAGAGTCTGACAACAGTGCAAGGGCTGAAGAAGGAGTTCAGCTACGAGAAGATCCTCAAGGACCTCAAGAAGGACTTCTGCTGCAACGGGACTGTGGTGCAGGACAAGGAGCTTGGCAAGATTATCCAACTCCAAGGCGACCAGCGCAAGAACGTATCCCATTTCCTCGTTCAGGCCGGTCTTGTCCGGAAGGACCAGGTCAAGATTCATGGTTTTTGA 474 0.4937 MRKPIFTFFIHIFLVCFPSLSKHLSFSSCRSYPCYLFPSLQQAKYMVDLEIQVPSAFDPFAEARESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKDFCCNGTVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVRKDQVKIHGF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02970 157 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 50 157 IPR005874 GO:0003743
Gma08g02970 157 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 46 157 - -
Gma08g02970 157 Pfam Translation initiation factor SUI1 72 145 IPR001950 GO:0003743|GO:0006413
Gma08g02970 157 ProSiteProfiles Translation initiation factor SUI1 family profile. 75 145 IPR001950 GO:0003743|GO:0006413
Gma08g02970 157 CDD eIF1_SUI1 73 156 IPR005874 GO:0003743
Gma08g02970 157 Gene3D - 39 157 - -
Gma08g02970 157 SUPERFAMILY eIF1-like 44 157 IPR036877 GO:0003743|GO:0006413
Gma08g02970 157 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 46 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02970 Gma-Chr8 46212761 46214653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02970 46 157 Eukaryotic Initiation Factors Gene Family AT5G54940 83.929 3.17e-69 203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02970 08 46212761 46214653 Gma08g02970 08 46212761 46214653 ECH
Gma18g00832 18 9649119 9658319 Gma08g02970 08 46212761 46214653 GST
Gma08g02970 08 46212761 46214653 Gma14g00202 14 1699568 1701162 PCT
Gma08g02970 08 46212761 46214653 Gma02g02738 02 53062247 53062591 PCT
Gma14g00202 14 1699568 1701162 Gma08g02970 08 46212761 46214653 PCT
Gma02g02738 02 53062247 53062591 Gma08g02970 08 46212761 46214653 PCT