Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02944 ATGAGTTGTTTTCCTTGTTGTACATCACAAGAGAGGATCAACAAGAAATCATTGAAGAAGAGCATTAAGGAATACCATGAAGAAAAAATTCTAGCCTCATTTGCCAACATCTCTGTTAAAACAGATAGTGGCAAGCGAAATCTCATAACAAATGAGCTAGCAAAGCTTGGGAAAGGAAACATTACCTCTAAGATATTTCCATATCGTGAGCTATGTGTTGCAACTCAGAACTTTAACCCTGCCAATATGATTGGTGAAGGAGGCTTTGGGAGGGTATACAAAGGACACcttaaaagcacaaatcaaGTTGTTGCTGTGAAGCAACTTGACAGGAATGGATTTCAAGGGAACAGAGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTTTTGCACCACCCTAACCTTGTCAACTTGGTAGGGTATTGTGCTGAAGGTGAACATAGGATTTTGGTGTATGAATATATGATCAATGGCTCTTTAGAAGATCACTTACTTGAAATAACTCCGGATAGAAAACCTTTGGACTGGCAGACTAGAATGAAAATTGCAGAAGGTGCAGCAAAAGGACTTGAATGTTTGCATGAACAAGCAAACCCACCAGTGatataccgcgatttcaaagcatcaaacatactgctagatgaaaacttcaatccaaagctctctgattttggacttgcaaagcttggtccaaCTGGAGACAAAACACATGTGTCCACAAGAGTGATGGGAACATAtggctattgtgctcccgagtatgcatcaaccgggcaattgacttcaaaatcagatgtgtacagttttggagtagtgtttttggagatgatcactggaagaagaGTAATTGATAATGCAAGACCATCAGAAGAGCAAAACTTAGTCCTTTGGGCACAACCACTTCTAAGAGATAGAATGAAGTTTACACAAATGGCAGATCCATTGCTAGAAGATAACTACCCCATAAAGAGTCTATACCAAGCTCTAGCAGTAGCAGCAATGTGTCTCCAAGAGGAAGCTGATACTCGACCTTTGATCAGTGATGTAGTTACAGCCATTGAGTTTTTAGCAAGGAAGAAAGTAGAAGTGGATGAACCACGACATACAAAAGAAACTTCTTCCACTCAAGATGGAGATAGTAGTGAACACAATGAATCTGATGAAGAATCTGATGGCGAGGAAGACGATGAGAATGAAGATGAGGAGAAGGATAAGAAC 1215 0.3292 MSCFPCCTSQERINKKSLKKSIKEYHEEKILASFANISVKTDSGKRNLITNELAKLGKGNITSKIFPYRELCVATQNFNPANMIGEGGFGRVYKGHLKSTNQVVAVKQLDRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCAEGEHRILVYEYMINGSLEDHLLEITPDRKPLDWQTRMKIAEGAAKGLECLHEQANPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTSKSDVYSFGVVFLEMITGRRVIDNARPSEEQNLVLWAQPLLRDRMKFTQMADPLLEDNYPIKSLYQALAVAAMCLQEEADTRPLISDVVTAIEFLARKKVEVDEPRHTKETSSTQDGDSSEHNESDEESDGEEDDENEDEEKDKN 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02944 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Gma08g02944 405 PANTHER OS07G0668900 PROTEIN 1 374 - -
Gma08g02944 405 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02944 405 MobiDBLite consensus disorder prediction 381 405 - -
Gma08g02944 405 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Gma08g02944 405 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 374 - -
Gma08g02944 405 CDD STKc_IRAK 84 353 - -
Gma08g02944 405 SUPERFAMILY Protein kinase-like (PK-like) 64 368 IPR011009 -
Gma08g02944 405 Gene3D Transferase(Phosphotransferase) domain 1 155 380 - -
Gma08g02944 405 MobiDBLite consensus disorder prediction 360 380 - -
Gma08g02944 405 MobiDBLite consensus disorder prediction 360 405 - -
Gma08g02944 405 Gene3D Phosphorylase Kinase; domain 1 51 154 - -
Gma08g02944 405 Pfam Protein kinase domain 82 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02944 Gma-Chr8 45919012 45922021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02944 1 384 Glycoside Hydrolase AT3G07070 58.524 5.22e-161 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gma08g02944 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02944 - - gmx:100790474 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02944 08 45919012 45922021 Gma08g02944 08 45919012 45922021 ECH
Gma08g02944 08 45919012 45922021 Gma14g00217 14 1855412 1858215 PCT
Gma08g02944 08 45919012 45922021 Gma02g02722 02 52921246 52923925 PCT
Gma14g00217 14 1855412 1858215 Gma08g02944 08 45919012 45922021 PCT
Gma02g02722 02 52921246 52923925 Gma08g02944 08 45919012 45922021 PCT