Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02929 ATGGTAACCATCAAAGCTTCTCACACTGTGGTTCCAAATCAACCAACACCTAAAGGTCGATTATGGCTATCAAATAGTGACCAAACCGCACGCCCAGCACACACACCAAACCTTTACATCTACAAAGCAAAACACAACATCATCGAATATGACATTGAGAAAATGATAGACTCTCTCAGCATCATTTTAGTGTACTACTATCCGGTAGCTGGCAGATTGAGTGTTACAGAAAGTGGTCGAATGGAAGTGGATTGCAACGCAAAGGGAGTGACATTGATCGAAGCCGAAACCGTGAAAACAATTGATGATTTTGGAGACTTCACACCTTCTGAGTCAGTCAAGGAAGAGCTTGTTCCAGTAATTGATTATCACTCTCAACCTATAGAAGAGATTCCTTTGGTCTTTGTCCAAGTGACAAGATTTAAAGGTGATAAAGAACAACAACAAGGCCTTGCTATTGCAGTCGCTGTTTCTCATCCTGTGGCTGATGGGTCTGCTTGGATTCACTTTATCAACACATGGGCTAAGGTTAATAGAGGTGACATGTTAGGTCTTAATGACATGCCATTTATAGATAGAACCATACTCAAATCTTCGTCGTCGTTGTCGTCGTTGTCACCACCACCCTCACCACGCTTCGATCACCCTGAGTTGCAGCCTCTACCATTCATACTAGGCAGATCTGATAGTACTGAAGAGCAAAAGAAGAAGACAACAGCTGCTATGTTGAAACTCACATCAGAACAAGTGGAGATGTTGAGGAAAAAGGTTAATGAAAATGAAAACTTATCAACAAAACAAGGGTCAAGATCAAGATCAAGATCAAGACCTTGTAGCAGATTTGAAGCTGTGGCTGCACATATATGGAGATGTGCATGTAAGGCTCGTAAACTGGATCGAAATCAACCAACCCTTGTTAGGTTCAACGCCGATTTTCGAAGCAGACTAACTCGGCCTCTCCCAAGGAATTATTTCGGGAATGCCTTGGCGGCCACAGTGACACCGGAATCTTATGCTGGAGAAATCACATCAAGACCATTGAGTTATGCAGCAAGAAAATTGAGAGAAGCTGTGGAGATGCTCAAGGAAGAATACATAACTTCGCAGTTAGAAGTTGTGTTGGGCGAGGAGCAATTGGAGTCCATAAAGGCTTTGTTCTCGAGACAAGGAGAACGTAGGAATTCTCCTTTTGCAGGAAATCCTAACCTTCAAATCACAAGCTGGATCAGCATTCCACTATATGAAGCAGATTTTGGGTGGGGAAAGCCTGAGCATTTTGTTCTGGGATATGTGTGTCCGTTTGATAGAGGGATTATTATTCGAGGTCCAGAAAATGATGGTTCTGTGATTGTGATCATATTGATCCATGAGGGAAAATGTTGA 1383 0.4252 MVTIKASHTVVPNQPTPKGRLWLSNSDQTARPAHTPNLYIYKAKHNIIEYDIEKMIDSLSIILVYYYPVAGRLSVTESGRMEVDCNAKGVTLIEAETVKTIDDFGDFTPSESVKEELVPVIDYHSQPIEEIPLVFVQVTRFKGDKEQQQGLAIAVAVSHPVADGSAWIHFINTWAKVNRGDMLGLNDMPFIDRTILKSSSSLSSLSPPPSPRFDHPELQPLPFILGRSDSTEEQKKKTTAAMLKLTSEQVEMLRKKVNENENLSTKQGSRSRSRSRPCSRFEAVAAHIWRCACKARKLDRNQPTLVRFNADFRSRLTRPLPRNYFGNALAATVTPESYAGEITSRPLSYAARKLREAVEMLKEEYITSQLEVVLGEEQLESIKALFSRQGERRNSPFAGNPNLQITSWISIPLYEADFGWGKPEHFVLGYVCPFDRGIIIRGPENDGSVIVIILIHEGKC 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02929 460 Gene3D - 1 220 IPR023213 -
Gma08g02929 460 MobiDBLite consensus disorder prediction 256 276 - -
Gma08g02929 460 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 453 - -
Gma08g02929 460 Coils Coil 351 371 - -
Gma08g02929 460 Coils Coil 243 263 - -
Gma08g02929 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 453 - -
Gma08g02929 460 MobiDBLite consensus disorder prediction 1 28 - -
Gma08g02929 460 Pfam Transferase family 1 456 - -
Gma08g02929 460 Gene3D - 226 459 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02929 Gma-Chr8 45655134 45656612 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02929 2 456 Monolignol Biosynthesis Gene Families AT5G48930 36.044 5.91e-88 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02929 K13065 - gmx:100777680 870.152