Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02917 ATGGCTGCAATCTTTGCTTCCAGATGCTCTCGTGTGGGCCGTTCTCTGTTCGGTGGATTAAGCAACAGTTCCCCTGGTTTATTTACCACATTACATGAGATGACATGCAAAAATATGTTTTCTCAGCAACAACGTACCTTCATACAGATGAGGACTGTTCTCAAGGTTGTGGATAACTCGGGGGCTAAAAAGGTGATGTGCATACAGGCATTGAAAGGGAAGAAAGGGGCAAGATTAGGTGACACAATAATAGCATCTGTGAAGGAAGCACATCCTAATGGAAAAGTGAAGAAAGGAAAGGTTGTATATGGGGTAGTGGTGCGTGCGGCAATGCAAAAGGGGCGTTGTGATGGCAGTGAAGTCAAGTTTGATGATAATGCTGTGGTGCTTGTTGACAAGCAAGGCCAACCTATTGGAACCAGAGTTTTTGGACCAGTGCCTCATGAGCTAAGGCAAAAGAAGCATGTCAAGATTCTTACCTTGGCAGGGCACATTGCATAA 501 0.4491 MAAIFASRCSRVGRSLFGGLSNSSPGLFTTLHEMTCKNMFSQQQRTFIQMRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02917 166 TIGRFAM rplN_bact: ribosomal protein uL14 48 165 IPR005745 GO:0003735|GO:0006412|GO:0015934
Gma08g02917 166 PANTHER 50S RIBOSOMAL PROTEIN HLP, MITOCHONDRIAL-LIKE ISOFORM X1 19 166 - -
Gma08g02917 166 Hamap 50S ribosomal protein L14 [rplN]. 47 166 IPR000218 GO:0003735|GO:0005840|GO:0006412
Gma08g02917 166 Pfam Ribosomal protein L14p/L23e 48 165 IPR000218 GO:0003735|GO:0005840|GO:0006412
Gma08g02917 166 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 19 166 IPR000218 GO:0003735|GO:0005840|GO:0006412
Gma08g02917 166 ProSitePatterns Ribosomal protein L14 signature. 104 130 IPR019972 -
Gma08g02917 166 SMART Ribosomal_L14_2 47 166 IPR000218 GO:0003735|GO:0005840|GO:0006412
Gma08g02917 166 Gene3D Ribosomal protein L14 47 166 IPR036853 GO:0003735|GO:0005840|GO:0006412
Gma08g02917 166 SUPERFAMILY Ribosomal protein L14 48 165 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02917 Gma-Chr8 45553833 45557222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02917 58 149 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.364 4.06e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02917 K02874 - gmx:100818301 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00941 18 11554680 11555296 Gma08g02917 08 45553833 45557222 GST