Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02910 ATGCAGCAAGATCACAGGAAAAAGAGTTCAGCAGAGATGGACTTTTTCTCTGAATATGGTGATGCCAACCGGTACAAAATCCAAGAAGTCATTGGGAAGGGAAGTTATGGTGTTGTCTGTTCAGCCATTGACACTCACACCGGTGACAAAGTGGCAATTAAGAAGATTCATGACATCTTCGAGCATATATCCGATGCTGCTCGTATTCTCCGTGAGATAAAGCTGCTTAGACTTCTACGACATCCTGATATTGTTGAAATAAAACACATTATGCTGCCTCCGTCAAGGAAGGACTTTAAAGATATTTACGTTGTTTTTGAGCTCATGGAGTCTGATCTTCATCAAGTCATTAAAGCCAATGATGACTTGACAAAAGAACACTATCAATTTTTTCTTTATCAATTACTTCGAGCACTGAAGTACATTCACACCGCAAATGTCTATCATCGAGATCTGAAGCCAAAGAATATACTGGCAAATGCAAACTGTAAGCTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCCTTTAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAGCTATGTGGATCATTTTACTCAAAGTATACACCAGCAATTGATATATGGAGTATAGGTTGCATCTTTGCTGAAGTACTAACAGGAAAGCCACTTTTTCCTGGGAAAAATGTAGTTCATCAATTGGATCTGATGACAGATCTGCTTGGGACTCCTTCACTTGATACTATATCACGGGTACGTAACGAGAAGGCAAGGAGATACCTAACTAGCATGCGGAAAAAGCAGCCTGTGCCATTCGCTCAAAAATTTCCCAATGCAGATCCTTTAGCACTAAGGCTACTGGAAAAGTTGTTGGCTTTTGATCCAAAAGACCGACCTACTGCTGAAGAGGCTTTGGCTGATCCTTACTTCAAGGGACTGGCAAAAGTTGAGAGGGAACCATCTTGCCAGCCTATCACGAAAATGGAATTTGAATTTGAAAGGCGAAGAGTTACAAAGGAAGAAATTCGTGAGCTGATTTTCCGTGAGATTCTAGAGTATCACCCTCAACTATTGAAGGACTACATGAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTCAGAAAGCAGTTTGCTCATTTAGAGGAAAATGGTAAAAATGGTCCTGTTATGCCACTTGACAGAAAGCATGTTTCTCTGCCAAGGTCTACAATTGTACATTCAAATACGGTACACTCAAAAGAGCAAACAAATAATGCTGCCAGCAAAAACCGGCCAACAGTTGAGGAATATAACAAGAACCCAAGAGATACAGAAATTCCAGTGCCAAGGTCAATGCAGGGACCACAAAGAATTCCACTAGCAAAACCTGGTAAAGTTGTTGGGCCCGTAGTTCCATACGAGCATGGTAACATTGTCAAGGATTCATATGATCCTAGGTCATTCATCAGAGGTTCTGTGCTTCCTACACAAGCTGTTCCCCCGGCATATTACTATCAAAGATCCAGCACTGGAAACCAAGAAAGGCCAGCGACAGAAGCCAACAAGAGTGTGCCTTTGCAGGCAAAACATGCACAGCAACAATGCGGAGTTAATGCCAAGATGGCACCAGACATAGCTATTAATATTGATACAAATCCCTTTTTTATGACAAGGGCAGGAGTTAACAAGTTAGAGCAAGGTGATCAAATAGCCATAGAGACAAACATGCTGCAGCCAAAGGCACATCAATATGGTGGAATCGGTGCTGCAGCTGGGGCCACTGCTCATAGAAAAGTTGGTCCTGTTCAGTATGGTATGACAAGAATGTTCTAG 1848 0.415 MQQDHRKKSSAEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGDKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPVPFAQKFPNADPLALRLLEKLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGKNGPVMPLDRKHVSLPRSTIVHSNTVHSKEQTNNAASKNRPTVEEYNKNPRDTEIPVPRSMQGPQRIPLAKPGKVVGPVVPYEHGNIVKDSYDPRSFIRGSVLPTQAVPPAYYYQRSSTGNQERPATEANKSVPLQAKHAQQQCGVNAKMAPDIAINIDTNPFFMTRAGVNKLEQGDQIAIETNMLQPKAHQYGGIGAAAGATAHRKVGPVQYGMTRMF 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02910 615 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Gma08g02910 615 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Gma08g02910 615 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gma08g02910 615 MobiDBLite consensus disorder prediction 424 468 - -
Gma08g02910 615 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 491 - -
Gma08g02910 615 MobiDBLite consensus disorder prediction 511 530 - -
Gma08g02910 615 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02910 615 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Gma08g02910 615 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02910 615 MobiDBLite consensus disorder prediction 424 439 - -
Gma08g02910 615 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02910 615 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Gma08g02910 615 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 491 - -
Gma08g02910 615 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02910 Gma-Chr8 45444480 45451807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02910 1 440 MAP Kinase Gene Family AT2G42880 87.613 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gma08g02910 Pkinase 4.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02910 - - gmx:100815293 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00956 18 11812061 11818679 Gma08g02910 08 45444480 45451807 GST
Gma08g02910 08 45444480 45451807 Gma14g00245 14 2082830 2088692 PCT
Gma08g02910 08 45444480 45451807 Gma02g02694 02 52706804 52713355 PCT
Gma14g00245 14 2082830 2088692 Gma08g02910 08 45444480 45451807 PCT
Gma02g02694 02 52706804 52713355 Gma08g02910 08 45444480 45451807 PCT