Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02888 ATGCCGTCGCAGTTGCTCCCTCAACTCTCTCCGCCAAAGCTCTATGTGGAGGTCTTAGAAAGTGGAGAACAGATAGGCTTAAAGCACTTTAGACCAATTAAACCATTGGGATCAGGAGATACGTACTGGCAGccaactaaggttctcaaggaagatgccgtgagATTTTATGCAGCAGAGGTAGTGATCGCATTGGAGTACCTTCATTGCCAAGAGCATGATAGGCCAAAATATGGGAATGCCAACTTAGAAGGGTACCCAAATAAACCAAAAGACATTTCCTCCATATCCATCTTTAAATCAAAAAGCTGCGGACGGCGGTGCAAGGATAAAAAGAGATCAAATAGCAGCAAGGAGATGGAAGAAGCTCGAAGTCGCAGAGGGTACGTTCCAGTGCTTGTGGGCACAGGGAAAGAAGGCATGGATGAGAAGATTTGGGTAACCATCAAAGCAATTCAGCATCTCACCATTGTTGAGTTACTGGAGCAGTCTGCAAAGGAGTATGGATACCAAAATGGCTTGCTCAAAATCTCATGTGATGCTGACAAATTCAAGGTCATACTTCACAACATATGCAAGAAATAG 585 0.4171 MPSQLLPQLSPPKLYVEVLESGEQIGLKHFRPIKPLGSGDTYWQPTKVLKEDAVRFYAAEVVIALEYLHCQEHDRPKYGNANLEGYPNKPKDISSISIFKSKSCGRRCKDKKRSNSSKEMEEARSRRGYVPVLVGTGKEGMDEKIWVTIKAIQHLTIVELLEQSAKEYGYQNGLLKISCDADKFKVILHNICKK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02888 194 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 112 193 IPR003676 GO:0009733
Gma08g02888 194 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 112 193 - -
Gma08g02888 194 Pfam Auxin responsive protein 111 188 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02888 Gma-Chr8 45124179 45133000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02888 44 71 AGC Kinase Gene Family AT3G45780 89.286 1.61e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02888 K20715 - pvu:PHAVU_008G194200g 82.0333