Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02884 ATGAATGCTAAGGTACATAGCTCTGATGATACCAAGAAGGATGAAGAAGTTGTGCTTCCTGGATTTAGATTCCATCCCACAGATGAAGAGCTTGTTGGGTTTTATTTGCAGAGAAAGGTGGACAAGAAGCCTCTAAAAATTGAACTCATCAAACAGGTTGATATCTACAAATATGATCCATGGGATCTTCCAAAGGTGAATTCATTTGGGGAGAAAGAGTGGTATTTTTTCTGCATAAGAGGGAGGAAGTACAGGAACAGCGTGAGGCCAAACAGGGTAACTAGGTCAGGGTTCTGGAAGGCCACAGGGATTGACAAGTCCATATATTGCGTGAAAGAGCCACATGAATGCATTGGCCTCAAGAAGTCATTGGTCTACTATCGTGGAAGTGCTGGCAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGCCTTCCACCCAATGCAAAATCCAACCCCAATGACCTTCAAGAAGCTGAGGTGTGGACACTGTGCAGGATATTCAAACGCATCCCATCTTTCAAAAAGTACACTCCAAATTTGAAAGACTCAACACCAGTCACCAAACCAAACCCTGTGAATTCCAACACATCCACCTTAAATTCTGACAATTGCGAGCCATATTTGATCTGCAGAGACCCTATGGTGATGCAACAAATCGAAAGAAAACCAGTTATTGGACAAGTTGATGAAAAGAAACACATGTTTCTGGGCCAGTTTGGTCCACTACCCCATCATCTTCAGGCCCCATCAACTACCCCTTACCCAAATTTTTGGGACCAGAATAATGTTGAGGATTATACATTTGCCAATGAGAATTGGGATGACCTAAGATCTGTGGTTCAGTTTGCAATTGATCCATCCACGGTGTTTGATTGTACAGGAACATATATTCCACCCTACTTTTCTTAG 915 0.4262 MNAKVHSSDDTKKDEEVVLPGFRFHPTDEELVGFYLQRKVDKKPLKIELIKQVDIYKYDPWDLPKVNSFGEKEWYFFCIRGRKYRNSVRPNRVTRSGFWKATGIDKSIYCVKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNAKSNPNDLQEAEVWTLCRIFKRIPSFKKYTPNLKDSTPVTKPNPVNSNTSTLNSDNCEPYLICRDPMVMQQIERKPVIGQVDEKKHMFLGQFGPLPHHLQAPSTTPYPNFWDQNNVEDYTFANENWDDLRSVVQFAIDPSTVFDCTGTYIPPYFS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02884 304 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
Gma08g02884 304 Gene3D NAC domain 27 174 IPR036093 GO:0003677|GO:0006355
Gma08g02884 304 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 295 - -
Gma08g02884 304 PANTHER - 2 295 - -
Gma08g02884 304 SUPERFAMILY NAC domain 14 170 IPR036093 GO:0003677|GO:0006355
Gma08g02884 304 ProSiteProfiles NAC domain profile. 18 171 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02884 Gma-Chr8 45084674 45090733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02884 8 171 NAC Transcription Factor Family AT5G39820 59.016 5.34e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma08g02884 NAM 1.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02884 - - gmx:100810472 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02884 08 45084674 45090733 Gma08g02884 08 45084674 45090733 ECH