Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02878 ATGGGTGCTGAGAATGGAGGTTTCTCCGTGAATGTGACCAATGAAGAGGTGGTGGCAGCAGTGGTGCCAATGCAAGAACATTGGCTTCCACTCTCTAACCTTGACCTACTTCTACCTCCAATCGATGTTGGTGTCTTCTTTTGCTATAAGAACCCCATGCTAACGTCCACTACCTTAGGGGACACTTGCACCAACAAAATAACCTTTGAATCAATGTTGGGGTCTCTAAAAAAGGCCTTAGCACAAGCTTTGATCTCTTATTATGCATTTGCAGGTGAAGTGGTGCCCAACAACGTGGGTGAACCCGAGGTGCTTTGTAATAATCGTGGTGTTGATTTTGTTGAAGCTGTGGCTGATGTTGAGCTAAAGTGCCTCAACTTTTACAACCCAGATGACACCATTGAAGGGAAGTTTGTTCCAAAGAAGAAAAATGGAGTGCTTACTGTCCAGgcaacatcaCTCAAGTGCGGTGGAATAGTACTAGCATGCATATTTGATCACCGCATAGCAGATGCATATTCAGCAAACATGTTCCTCATATCATGGGCCGAGATAGCCCAGCCCACGAAGCCCACAACTACTACCACCACCCCATGTTTCCGTCGCTCACTCCTTAGTCCTCGTCGCCCAAGTTCTATTCCTCGTTCCCTTTATGACATGTACCTCCCCATTTCTAAGATCACCCCTCCTCAAGCCACAACCGCCCCTCTCCTCAGTCGCATATACTATGTAACGGCAGAGCAACTTGAAAAGATGCAATCCCTCGTCGTCATGACAAATGAAAACAACACAAAGCGTACAAAATTTGAGTGTTTCTCCGCGTTCTTGTGGAAGATAGTTGCTCAGGCAGCTTCAAGAGGCAACAAGAAGGGCAAAAAGGTTATTGCCAAAATGGGTATTGTGGTTGATGGAAGGAAGAGACTGTGTGATGGTGACAAAGAGAAGGAAGCATTGATGGGGTGTTACTTCGGCAACGTGCTTTCCATACCCTTTGGAGGGAAAGAAGTGGAGGAGTTGATGGAGAAGCCATTAGGGCTTGTTGCCGAAGCGGTTCACGAGTTCTTGGCGGTGGCGACGAAGGAGCATTTCTTAGGGCTCATTGATTGGGTGGAAGCTCACCGGCCAGAGCCTGGGGTGGCGAAGATTTACTGTGGTGGTGGCAGTGGCGACGAAGGGCCGAGTTTTGTGGTGTCTTCCGGGCAAAGGTTAATGGAGGGAAAGATGGATTTTGGGTGGGGGGAGGTTGTGTTTGGATCTTTCCATTTTCCTTGGGGTGGTCAAGCTGGTTATGTTATGCCAATGCCAAGCCCTTTAGGGAATGGTGATTGGGTTGTGTACATGCATCTTGCCAAGGAGCAATTGGAGGTCTTAGAATCTGAGGCCAGTGATGTCTTTAGGCCTATAAGTTGGGATTACCTTAATCAGTGA 1428 0.4748 MGAENGGFSVNVTNEEVVAAVVPMQEHWLPLSNLDLLLPPIDVGVFFCYKNPMLTSTTLGDTCTNKITFESMLGSLKKALAQALISYYAFAGEVVPNNVGEPEVLCNNRGVDFVEAVADVELKCLNFYNPDDTIEGKFVPKKKNGVLTVQATSLKCGGIVLACIFDHRIADAYSANMFLISWAEIAQPTKPTTTTTTPCFRRSLLSPRRPSSIPRSLYDMYLPISKITPPQATTAPLLSRIYYVTAEQLEKMQSLVVMTNENNTKRTKFECFSAFLWKIVAQAASRGNKKGKKVIAKMGIVVDGRKRLCDGDKEKEALMGCYFGNVLSIPFGGKEVEELMEKPLGLVAEAVHEFLAVATKEHFLGLIDWVEAHRPEPGVAKIYCGGGSGDEGPSFVVSSGQRLMEGKMDFGWGEVVFGSFHFPWGGQAGYVMPMPSPLGNGDWVVYMHLAKEQLEVLESEASDVFRPISWDYLNQ 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02878 475 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 469 - -
Gma08g02878 475 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 469 - -
Gma08g02878 475 Pfam Transferase family 9 463 - -
Gma08g02878 475 Gene3D - 9 219 IPR023213 -
Gma08g02878 475 Gene3D - 224 460 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02878 Gma-Chr8 45022227 45025323 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02878 10 458 Monolignol Biosynthesis Gene Families AT5G48930 25.000 9.63e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02878 - - gmx:100777149 923.309