Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02874 ATGATGTCCTTGCGCTGCGCTAAAGCCCACTTACTGGTCTCCGTGTCATTAGCTTACTGTGTTGTGCATTGCATTGCCCCTTCATCACATCATCAACAACATTCACTTCAATTTCTGAGAATCTCTTCTGATGCTGAATCAGACGATGAAAACCACCACAAAGGTGACACCTTTACTGTGTCTTACCTCATCAACTCATGGGGATTGTCCCCAAAACTAGCCAGTGAACTCTCCAATAGGGTCAATTTGAAAAACCCAGATGGCCCAAATGCTGTTATTAATCTTCTCAACAAATATGGGTTTGAAAAAACCCATCTTGCAAAACTTGCGGAGATAAAGCCCTCCGTCATTGCTGCAAATGCAGAGAATACCCTTTTGCCGAAACTCAAGTTCTTCCGTTCTATTGGGATTTCCAACGCTGACATGCCTAAAATCCTAATTGCTAGCCATCATATGTTGTTTAGAAGCTTGGACAAATGCCTCATTCCACGGGTTTTGAGGGAATCTGGCGTGCCTCAAGGTTCCATATCTTACCTGTTGATGCATTCTGGGACTCTAGCCTACAGGGACCATTCCAAATTTGTGGAAGCTGTTAACACTGCTAAGGGATTTGGGTTTAATCCTTTGAAAAGAACTTTTGTCGTGGGTGTTGAAGTTCTTGCCAATAAGAGCAAAGCAGTATGGGAATCAAGGTTTGAGGTTTATGAGAGGTGTGGCTGGAACCGCGAAATAGCTCTTGGAGCAGTTCGAAAGTTTCCCAGTATTGTGAAGTTGTCAGAGGAAGTGTTTATAAAAAAAATGAGTTTCCTAGTGAAGGATATGGGTTGTTCATCAGAAGATATTGCTGAATATCCTCAAGTTGTAACGTACAACTTGGAGAAGAGGATTATCCCTAGATTCTCGATAATCAAAATGTTGAAATCAAAAGGTCTGCTCAAGAAAAATTTGCACTTCAGTGCCATTATTTGCATAACCGAGGCAAATTTTTTGGAGAAATTTGTCATCAATTTTCAGAAAGATTTGCCTTTCTTGCCAGATTACTACAACAGTTTGGCAAATCAACAGAATGTATTATAG 1077 0.4085 MMSLRCAKAHLLVSVSLAYCVVHCIAPSSHHQQHSLQFLRISSDAESDDENHHKGDTFTVSYLINSWGLSPKLASELSNRVNLKNPDGPNAVINLLNKYGFEKTHLAKLAEIKPSVIAANAENTLLPKLKFFRSIGISNADMPKILIASHHMLFRSLDKCLIPRVLRESGVPQGSISYLLMHSGTLAYRDHSKFVEAVNTAKGFGFNPLKRTFVVGVEVLANKSKAVWESRFEVYERCGWNREIALGAVRKFPSIVKLSEEVFIKKMSFLVKDMGCSSEDIAEYPQVVTYNLEKRIIPRFSIIKMLKSKGLLKKNLHFSAIICITEANFLEKFVINFQKDLPFLPDYYNSLANQQNVL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02874 358 Pfam mTERF 93 149 IPR003690 GO:0003690|GO:0006355
Gma08g02874 358 Pfam mTERF 218 329 IPR003690 GO:0003690|GO:0006355
Gma08g02874 358 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 27 164 - -
Gma08g02874 358 Gene3D Transcription termination factor 3, mitochondrial 70 341 IPR038538 -
Gma08g02874 358 SMART mt_12 278 312 IPR003690 GO:0003690|GO:0006355
Gma08g02874 358 SMART mt_12 246 277 IPR003690 GO:0003690|GO:0006355
Gma08g02874 358 SMART mt_12 107 138 IPR003690 GO:0003690|GO:0006355
Gma08g02874 358 PANTHER CGI-12 PROTEIN-RELATED 165 350 IPR003690 GO:0003690|GO:0006355
Gma08g02874 358 PANTHER CGI-12 PROTEIN-RELATED 27 164 IPR003690 GO:0003690|GO:0006355
Gma08g02874 358 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 165 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02874 Gma-Chr8 44979835 44981172 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma08g02874 mTERF 1.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02874 K15032 - gmx:100806920 613.994