Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02873 ATGGATGAATGGAGAAGAAAAAACACCGGCTTTGGCTCCAAAGAGATTCATCAATCATCAGATACATCAAATGCTGTCCTTAGTCTTCTGAAAACCTACGGATGCTCCGAAAGCCAGTTCTCTGTCTTGCCAAGAGGAACCTCTTTTGATTCTGAATCAGATGGAAACCACCATAAAAGTGGCACCTTTACTGTGTCTTACCTCATTAACTCATGTGGGGTGTCCCCAAAACTGGCAAGGGAACTCTCCAACAGGGTCAATTTGAAAAACCCTGATGGCCCAAATGCTGTTCTTGATCTTCTCAAGAATTATGGGTTCTGCAAAACAAAACTTGCAAAACTTGTTGGGAGACATCCTTTAGTGCTTGTTGCAGATGCAGAGAATACCCTTTTGCCTAAACTCAAGTTCTTTCGTTTTATTGGGGTCTCCGACGCTGGCATGCCTAAAATCCTGATTGCTAATAGTTCTATCTTGAAGAGGAACTTGGAAAAATGCCTCATCCCACGTTATGAGATCCTAAAGAGTGTACTTTGTGATGATCGGGAAGTTGTTAGAGCTTTGAGAAATTCCCCTCTTGGTTTTATATATGGTGACTTAGTGAATGCCTTGGTTCCAAACATTAAAATTTTGAAGCAATGTGGTGTGGCTCAGGCATCCATATCATTACTAATAACCATTGCTCTGTCTGCAGCGTATGTGAAGCATTCCAGATTTGTGGAAGCAGTCAAAACAGTTAAGGAAATTGGGTTTAGTCCTTTGAAAAATAATTTTGTCGTGGCTATTTCTGTGCTTGTAACTATGAGGAAATCAGTCTGGGATTCAAGGTTTGAGGTTTACCAGAGGTGGGGCTGGAACCATGAAATGTCTCTTCGAGCATTTAGAAAGTTTCCTGGTTTTATGATATTTTCAGGGGAGACTTTTACCAAGAAAATGAGTTTCCTGGTGAAGGATATGGGTTGGCCATCAGAAGCTATTGCTGAATATCCTCAAGTTGTAGCGTACAGCTTGGAGAAGAGAATTATCCCTAGATTCTCAGTAATCAAAATCTTGAAATCAAAAGGGACCAAAGAGCCAATTCTGAACAAAGAAGATACAACGCCATTGTTGGAGCACAACATGAAGAATTTCAACTTCAAAACGCTAGAAGAGCAATCCCTATGCCAATTCAAAGCACAATATTAG 1182 0.4061 MDEWRRKNTGFGSKEIHQSSDTSNAVLSLLKTYGCSESQFSVLPRGTSFDSESDGNHHKSGTFTVSYLINSCGVSPKLARELSNRVNLKNPDGPNAVLDLLKNYGFCKTKLAKLVGRHPLVLVADAENTLLPKLKFFRFIGVSDAGMPKILIANSSILKRNLEKCLIPRYEILKSVLCDDREVVRALRNSPLGFIYGDLVNALVPNIKILKQCGVAQASISLLITIALSAAYVKHSRFVEAVKTVKEIGFSPLKNNFVVAISVLVTMRKSVWDSRFEVYQRWGWNHEMSLRAFRKFPGFMIFSGETFTKKMSFLVKDMGWPSEAIAEYPQVVAYSLEKRIIPRFSVIKILKSKGTKEPILNKEDTTPLLEHNMKNFNFKTLEEQSLCQFKAQY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02873 393 Pfam mTERF 269 361 IPR003690 GO:0003690|GO:0006355
Gma08g02873 393 Pfam mTERF 98 260 IPR003690 GO:0003690|GO:0006355
Gma08g02873 393 Gene3D Transcription termination factor 3, mitochondrial 163 389 IPR038538 -
Gma08g02873 393 SMART mt_12 112 143 IPR003690 GO:0003690|GO:0006355
Gma08g02873 393 SMART mt_12 255 285 IPR003690 GO:0003690|GO:0006355
Gma08g02873 393 SMART mt_12 290 321 IPR003690 GO:0003690|GO:0006355
Gma08g02873 393 SMART mt_12 148 179 IPR003690 GO:0003690|GO:0006355
Gma08g02873 393 SMART mt_12 322 356 IPR003690 GO:0003690|GO:0006355
Gma08g02873 393 SMART mt_12 184 216 IPR003690 GO:0003690|GO:0006355
Gma08g02873 393 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 52 358 - -
Gma08g02873 393 PANTHER CGI-12 PROTEIN-RELATED 52 358 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02873 Gma-Chr8 44971493 44975569 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma08g02873 mTERF 6.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02873 K15032 - gmx:100806386 681.019