Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02868 ATGCATCATTTTCTGTTTGCAAGATTAACTACTAGAACACTCCATTATAGTGTTCTCTTACACAATGTTACGCCTTTCTTCACTTCACGCACTCTATCTGTATCAAGCACAAATCATCGCAAAGATGGCACCTTTAATGTATTTAGCCTCATCAACTCATGTGGGTTGTCCCCTGAAGTGGCCCTGAAACTCTCCAGAAGGTTGGAATTGAAAAACCCAGATGGGCCAAACGCTGTAATTGAGATTCTCAGGAACTATGGGTTTTCTGATACCCAGCTATGTAGCCTTGTAAAGAAAATCCCTTTGGTGCTTTTGTCAAAACCTGAAAAGACCCTTTTGCCAAAACTCAAGTTCTTCCTTTCTATTGGGTTTTCAACCACTGACCTTCCCAGATTCCTCATTGGAAACACTACATTTTTGGGATTGAGCTTGCACAAAACCATTATCCCCCGTTACCAGATCATCAAGAGTCTAGTTCACAGTGATAAAGAAGTAGTTTCCACTTTGAAGAATGATAGGAGGTACTTTAACCGTTGGATGTCAATCGATGCGGTTCGAAATGTAGGGACTTTGAGACACCTTGGGGTGCCTCAACGTTCCATTTCGTTATTGGTAACCAATTTTCCTAGTGTAACATTTATGGAGCATTCGAGGTTTTTTGAGGCTGTGGAGAAAGTGAAGGTAACTGGGTTTGATCCTTTGAAATCAAATTTTGTATTGGCACTTCAAGTGCTTGCAAAGATGAATGAGGCAATGTGGGAATCCAAATTAATGGTTTTTGAGAAGTGGGGATGGTCCAGAGATATCTGTCTTTTAGTTTTCAAAAAGCATCCCCAATTTATTATGTTGTCAGAAGAGAAGATTATGAAAATATTGAACTTCTTGATGAAAGACATAGGTTTGCCCGTAGAGAACATCGCTGGATGCCCTGAGGTTCTTAAATGCAACCTGGAGAAGACAGTTATGCCTAGATTTGCAGTTGTTGAAATTTTGAAGTCAAGGGGTTTGATAAAGAGAGATTCTAAAATAAGTAGCTTTATCAAGATCAGCGAGAAAATGTTTTTGGAGAAATATGTGATCCGATTTCTAAAAAATGAGCCACTACTACTGGATGCATACAGAGGTCAGAAGTCAAATTGA 1140 0.3939 MHHFLFARLTTRTLHYSVLLHNVTPFFTSRTLSVSSTNHRKDGTFNVFSLINSCGLSPEVALKLSRRLELKNPDGPNAVIEILRNYGFSDTQLCSLVKKIPLVLLSKPEKTLLPKLKFFLSIGFSTTDLPRFLIGNTTFLGLSLHKTIIPRYQIIKSLVHSDKEVVSTLKNDRRYFNRWMSIDAVRNVGTLRHLGVPQRSISLLVTNFPSVTFMEHSRFFEAVEKVKVTGFDPLKSNFVLALQVLAKMNEAMWESKLMVFEKWGWSRDICLLVFKKHPQFIMLSEEKIMKILNFLMKDIGLPVENIAGCPEVLKCNLEKTVMPRFAVVEILKSRGLIKRDSKISSFIKISEKMFLEKYVIRFLKNEPLLLDAYRGQKSN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02868 379 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Gma08g02868 379 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Gma08g02868 379 SMART mt_12 303 337 IPR003690 GO:0003690|GO:0006355
Gma08g02868 379 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Gma08g02868 379 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 376 - -
Gma08g02868 379 Pfam mTERF 248 355 IPR003690 GO:0003690|GO:0006355
Gma08g02868 379 Pfam mTERF 80 300 IPR003690 GO:0003690|GO:0006355
Gma08g02868 379 Gene3D Transcription termination factor 3, mitochondrial 137 365 IPR038538 -
Gma08g02868 379 PANTHER CGI-12 PROTEIN-RELATED 21 376 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02868 Gma-Chr8 44918537 44919676 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma08g02868 mTERF 4.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02868 K15032 - gmx:106799612 730.324