Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02867 ATGTACCATTTTCTTATTGCTAGATTAACAACTAAGACACCCCATTATGGTGTTCTCTGTCACAATGCAATTCTTTTCTTCAATTCACGTACTCTTTCTGTATCAAACACAAATCACTACAAAGGTGGCACCTTCAATGTATTTAGCCTCATCAACTCATGTGGGTTGTCCCCAGAAAAGGCACAGAAACTCGCCAATAGGTTGAAATTGAAAAACCCTAATGGGCCAAATGCGGTAATTGATATTCTCAGGAACTATGGATTCTCTGAGACTCAGCTATGTAGCCTTGTAAAGCAACGCCCTTTTGTGCTTTTGTCAAAACCTGGAAAGACCCTTTTGCCAAAACTCAAGTTCTTCCATTCTATTGGGTTTTCAACCACTGACCTTCCCAGATTCCTCATTGGAAACATTACATTATTTTATTTTAGCTTGAATAAATCCATTATCCCATGTTATCAGATTATCAAAGGTCTAGTTTGCAGTGATAAGGAAGTAGTTTCCACTTTAAAGCATTATAAGTGGTCCTGTAGCAGTCGAAGGTTAATTAACCATTCAGTTAGAAATGTAGGGGCTTTGAGACAGCTTGGGGTGCCACAACGTTCCGTTTCCTTGTTAGTAACTAATCATCCTGGTGCAACATTTATGAAGCATTCAAGATTTGTTGAGGCTTTGGAGAAAGTGAAGGAAATGGGGTTTGATCCTTTGAAATCAAATTTTGTTATGGCACTTAAATTGTTTGCAACGATAAATGAAGCAACGTGGAAATCAAAATTAGAGGTTCTTGGGAGGTGGGGCTTTTCTAGAGATATCTGTCTTTTGGCTTTCAAAAAGCAACCCCAGTTTATGATGTCGTCGGAAAAGAAGATTATGAAAATGTTGAACTTCTTGGTGAAAGATATGAGTTTGCCCCCAGAAGACATTGCTAGATGCCCTGAAATTCTTGGATGCAACTTGGAGAAGACAGTTATTCCTAGATTTGCAGTTGTTAAAAATTTGAAGTCAAGGGGTTTGATAAAGAGTGATCTGAAAACAAGTTCCTTTATTAAGATAAGTGAGAAAATGTTTTTGGAGAGATATGTGACCCGATTTCAGAGAAATGAGCCACTACTATTGGATGCATACAGAGAAAAAACAGCCACAACTCAACAGTAG 1152 0.3802 MYHFLIARLTTKTPHYGVLCHNAILFFNSRTLSVSNTNHYKGGTFNVFSLINSCGLSPEKAQKLANRLKLKNPNGPNAVIDILRNYGFSETQLCSLVKQRPFVLLSKPGKTLLPKLKFFHSIGFSTTDLPRFLIGNITLFYFSLNKSIIPCYQIIKGLVCSDKEVVSTLKHYKWSCSSRRLINHSVRNVGALRQLGVPQRSVSLLVTNHPGATFMKHSRFVEALEKVKEMGFDPLKSNFVMALKLFATINEATWKSKLEVLGRWGFSRDICLLAFKKQPQFMMSSEKKIMKMLNFLVKDMSLPPEDIARCPEILGCNLEKTVIPRFAVVKNLKSRGLIKSDLKTSSFIKISEKMFLERYVTRFQRNEPLLLDAYREKTATTQQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02867 383 Pfam mTERF 293 355 IPR003690 GO:0003690|GO:0006355
Gma08g02867 383 Pfam mTERF 80 296 IPR003690 GO:0003690|GO:0006355
Gma08g02867 383 PANTHER CGI-12 PROTEIN-RELATED 24 377 IPR003690 GO:0003690|GO:0006355
Gma08g02867 383 Gene3D Transcription termination factor 3, mitochondrial 136 366 IPR038538 -
Gma08g02867 383 SMART mt_12 203 233 IPR003690 GO:0003690|GO:0006355
Gma08g02867 383 SMART mt_12 304 335 IPR003690 GO:0003690|GO:0006355
Gma08g02867 383 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Gma08g02867 383 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Gma08g02867 383 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
Gma08g02867 383 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 24 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02867 Gma-Chr8 44914120 44915459 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma08g02867 mTERF 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02867 K15032 - gmx:106799612 753.051