Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02847 ATGACCAGCAGTGTGATTCTCAGAAGATCCTCTTCCGTAATCTCGCGCCGCTTCTTCGCCGCTCTCGCCTCCGTCGAGCCGCTTCCTCGCAGGTTCCCCGCCGACAGGTACGGTGTCTCCGGCGACGGATCCCGAACCATTCACACGAATCCCGGACCGTTGAATTTCCGCGCGTCGGCGGTTCCTCGCGCGGCGCAGTTCGCTGTCGAGCGCGATTACTCTAACTACGAGGAGGTTAGCGGCGCGAACAGTGACGAAGGACTAGAGATCGCGAATCTCGGGATCGCTCCGCAGATTGTAGATGCTCTGGCCAAGAAAGGGATTGCGAAGCTCTTCCCCATTCAGGCAACAGCTGTGCTGGAACCTGCAATGCAAGGACGTGATATGATTGGTCGAGCTAGAACAGGAACAGGGAAAACTCTTGCTTTTGGGATACCCATCTTGGACAGTATCATTCAGTTTAATGCTAAGCATGGGCAAGGAAGACATCCTTTGGCTTTGGTTTTGGCTCCGACTAGAGAACTTGCGCGGCAGGTTGAGAAGGAATTCAATGAGGCTGCACCTAACTTGGCCATGATCTGTCTTTATGGGGGTATGCCCATCCAGCAACAAATGAGGCAGCTTAATTATGGCGTAGATATTGCAGTAGGCACTCCTGGTCGAATTATTGATCTCCTCAACAGGGGGGCACTGAATTTAAAGAATGTCAAGTTTGTTGTTCTTGATGAAGCTGATCAGATGCTTCAAGTAGGATTTCAAGAAGCTGTGGAGAAGATCCTGGAAGGGTTGTCTCCAAATCGTCAGACCCTTATGTTCTCAGCAACAATGCCATCTTGGATAAAGAATATTACCCGCAATTACCTGAACAACCCCCTAACCATTGATCTTGTTGGAGATTCTGATCAGAAGTTGGCAGATGGAATTTCGTTGTACTCTATTGTGTCTGATTCGTACACTAAAGCAGGAATTCTTGCACCTCTGATAACAGAACATGCGAATGGAGGAAAGTGTATTGTTTTCACTCAAACGAAACGTGATGCTGATCGATTATCATATGTCATGGCAAAAAGCCTTAGATGCGAGGCTTTGCATGGAGATATTTCACAAACTCAGAGGGAAAAAACTCTTGCTGGCTTCAGAAACAACAATTTTAATGTTTTAGTGGCAACTGATGTTGCTTCACGTGGGCTTGATATTCCCAATGTTGATCTTGTAATACATTACGATCTTCCCAATTCATCTGAGATATTTGTTCATCGATCTGGACGAACTGGCCGTGCTGGGAAGAAAGGAAGTGCGATTCTTGTTTACACACAAGGCCAATCCAGGGCTGTGCAGACTATTCAGCGTGATGTTGGATGCAAATTTACAGAGCTACCAAAGATTGATGCTCCTGCTGGATCAGCAGAGATGTTTACTGGCATGGGTGGTGGTCGATCTGGCTCTATGAGGGATCGTCAATCTGGAGGTACAGGTTTTGGTCGCAATCCTGGACTTGGTCGTTCTGGGAGTTACGGAAACTCTGGATTTGGCCGATCTAGCTATGGAAATTCCAGTGAGATGAATAGATATGATGGTGGCTTTGGTTCTGGTCAAGCAGGAACTCGATTTGGTGGAAAGTCTCGCCCCAGTGGTTTTGGAGGATTTGGTAGTTCAAACCAATCTGGCAGTTTTAGAAATTTTGGGTCGGGTCAATCTGGTGCATATGGTGACAGAATGTCAAGCCAAAGCAGCACCTTTGGTAATTTACATGGTGGTGGTTTCGGTGCTTTTGGGAATAATCCAAATGTTGACAGTTACAACAGAGGAAAGGCTTTTTAA 1821 0.4706 MTSSVILRRSSSVISRRFFAALASVEPLPRRFPADRYGVSGDGSRTIHTNPGPLNFRASAVPRAAQFAVERDYSNYEEVSGANSDEGLEIANLGIAPQIVDALAKKGIAKLFPIQATAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDSIIQFNAKHGQGRHPLALVLAPTRELARQVEKEFNEAAPNLAMICLYGGMPIQQQMRQLNYGVDIAVGTPGRIIDLLNRGALNLKNVKFVVLDEADQMLQVGFQEAVEKILEGLSPNRQTLMFSATMPSWIKNITRNYLNNPLTIDLVGDSDQKLADGISLYSIVSDSYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYVMAKSLRCEALHGDISQTQREKTLAGFRNNNFNVLVATDVASRGLDIPNVDLVIHYDLPNSSEIFVHRSGRTGRAGKKGSAILVYTQGQSRAVQTIQRDVGCKFTELPKIDAPAGSAEMFTGMGGGRSGSMRDRQSGGTGFGRNPGLGRSGSYGNSGFGRSSYGNSSEMNRYDGGFGSGQAGTRFGGKSRPSGFGGFGSSNQSGSFRNFGSGQSGAYGDRMSSQSSTFGNLHGGGFGAFGNNPNVDSYNRGKAF 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02847 606 MobiDBLite consensus disorder prediction 467 577 - -
Gma08g02847 606 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 120 294 IPR014001 -
Gma08g02847 606 Pfam DEAD/DEAH box helicase 113 282 IPR011545 GO:0003676|GO:0005524
Gma08g02847 606 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 323 467 IPR001650 -
Gma08g02847 606 MobiDBLite consensus disorder prediction 546 577 - -
Gma08g02847 606 Pfam Helicase conserved C-terminal domain 323 428 IPR001650 -
Gma08g02847 606 SMART helicmild6 348 428 IPR001650 -
Gma08g02847 606 Gene3D - 315 471 IPR027417 -
Gma08g02847 606 CDD SF2_C_DEAD 308 437 - -
Gma08g02847 606 CDD DEADc 99 295 - -
Gma08g02847 606 Gene3D - 89 298 IPR027417 -
Gma08g02847 606 MobiDBLite consensus disorder prediction 501 525 - -
Gma08g02847 606 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE-LIKE PROTEIN 4 566 - -
Gma08g02847 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 444 IPR027417 -
Gma08g02847 606 PANTHER RNA HELICASE 4 566 - -
Gma08g02847 606 SMART ultradead3 107 311 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02847 Gma-Chr8 44674424 44681534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02847 92 460 Eukaryotic Initiation Factors Gene Family AT3G19760 32.708 2.53e-63 213