Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02846 ATGGCTACTACCCTTTCTTCTATCAGTTTTGTACACTTTTGCATGCACTTCCTCCTTGTGTGTCTCACTAGTCCTGCATATGTTTCTTCACTCCCTCTTTCCCTGAGAAGGCAAGCTTCAATCCTTGTTTCTATGAAGCAAGATTTTGGAGTTGCAAATTCTTCTCTGAGGAGCTGGGACATGTCAAACTACATGTCCCTTTGCAGCACTTGGTATGGCATTGAGTGTGACCATCATGACAACATGTCTGTGGTGTCACTTGACATATCCAATTTGAATGCCTCAGGGTCACTTTCACCTTCCATCACAGGACTCTTGAGCCTTGTGAGTGTCTCACTCCAGGGAAATGGCTTCTCTGGGGAGTTTCCAAGGGACATTCACAAGCTACCAATGCTGAGGTTCCTCAACATGTCCAACAACATGTTCAGTGGAAACTTGAGTTGGAAATTCTCTCAGCTGAAGGAACTTGAAGTGCTGGATGTCTATGACAATGCTTTCAATGGCTCACTTCCTGAAGGTGTCATCAGTCTCCCAAAGATCAAGCACTTGAACTTTGGAGGGAACTACTTCTCTGGTGAAATCCCTCCAAGCTATGGAGCCATGTGGCAGCTGAACTTTCTGTCCCTTGCAGGGAATGATTTGAGAGGCTTCATACCAAGTGAGCTTGGGAATCTCACTAACTTGACTCATCTTTACTTAGGATACTACAATCAGTTTGATGGTGGAATCCCTCCTCAATTTGGTAAGCTGACCAATTTGGTTCATCTTGACATTGCAAACTGTGGCTTGACAGGTCCAATTCCTGTTGAGTTAGGAAACCTCTATAAGTTAGACACTCTTTTCTTGCAAACCAATCAGCTAAGTGGTTCAATCCCTCCCCAGTTAGGAAACTTGACCATGTTAAAAGCCCTTGATCTATCATTCAACATGCTCACAGGAGGTATCCCTTATGAGTTCTCTGCACTTAAAGAGCTTACCCTCTTGAACTTGTTTATAAACAAGTTGCATGGAGAAATTCCTCACTTCATTGCTGAGCTACCTAGATTGGAGACTCTGAAGCTTTGGCAGAACAACTTCACTGGAGAGATTCCTTCAAACCTTGGCCAGAATGGAAGGCTGATTGAGCTTGACTTGTCAACAAATAAGCTCACTGGTTTGGTGCCAAAATCTCTATGCCTTGGAAAGAGGCTGAAAATCTTGATCCTACTCAAGAACTTTCTGTTTGGATCTTTGCCGGATGATCTTGGTCAATGCTACACACTCCAAAGAGTCCGTTTGGGGCAGAACTATTTAACTGGGCCACTGCCACATGAGTTTCTTTATTTGCCTGAGCTACTACTTGTGGAGCTACAGAACAATTATCTTAGTGGTGGCTTTCCACAATCAATAACAAGCAGCAACACATCCTCAAAACTAGCACAGTTGAACCTATCAAACAACCGGTTTTTGGGGTCTCTTCCGGCCTCAATTGCAAATTTTCCAGACTTGCAAATCCTTCTGCTCAGTGGAAACAGATTCTCAGGTGAAATACCACCAGATATAGGGAGGTTGAAAAGTATCCTCAAGTTGGATATTAGTGCCAACAACTTTTCAGGTACTATTCCACCTGAGATAGGTAACTGTGTCTTACTGACCTATTTAGATTTGAGCCAAAACCAACTCTCAGGTCCTATTCCAGTCCAATTTTCTCAAATTCACATATTAAACTATCTCAATGTCTCATGGAACCACCTAAACCAAAGCCTTCCCAAGGAACTTAGGGCCATGAAGGGCTTAACTTCAGCAGATTTCTCTCACAATAACTTCTCAGGATCAATACCTGAGGGGGGCCAATTCTCAATATTTAATTCCACATCATTTGTTGGTAATCCTCAGCTATGTGGATATGATTCCAAACCATGCAACCTTTCTTCAACAGCTGTGTTGGAATCTCAAACAAAAAGCAGTGCAAAACCCGGTGTTCCCGGGAAATTCAAGTTCCTCTTTGCATTGGCATTGTTGGGGTGCTCATTGGTGTTTGCAACATTGGCCATCATCAAGAGTAGGAAGACAAGGAGGCACTCCAATTCATGGAAGTTAACAGCATTCCAGAAGCTGGAATATGGGAGTGAGGACATCAAAGGGTGCATAAAGGAAAGCAATGTGATAGGAAGAGGAGGATCTGGTGTTGTGTACAGAGGAACCATGCCAAAGGGAGAGGAAGTGGCAGTGAAGAAGCTCTTAGGAAACAACAAAGGATCTTCCCATGACAATGGCCTCTCTGCAGAAATAAAAACATTGGGGAGAATCaggcacaggtacattgtgaagctactagcattttgttcgaacagagagaccaatttgcttgtttatgattacatgccaaatggaagcttgggagaagtcttgcatgggaagaggggtgagtttctcaagtgggacactaggctcaaaatagccatagaagctgcaaaaggactttgctatttgcaccatgattgttcccctttgatcatccatagggatgtcaagtcaaacaacatactgctgaactctgattttgaggctcatgttgctgattttggacttgccaagttcatgcaagataatggggcatctgagtgcatgtcttccattgctggctcttatggctatattgctccagaatatgcatacacattgaaagtggatgagaaaagtgatgtttatagctttggagtggtgctgctagaactgataacgggcagaaggccgTTTTCCAGCAATAATTATTCACCACCTGCATCTCAGGCAATGAAAGAAAATAAGTTTATACATAGGTTCTTAAGATAA 2814 0.3614 MATTLSSISFVHFCMHFLLVCLTSPAYVSSLPLSLRRQASILVSMKQDFGVANSSLRSWDMSNYMSLCSTWYGIECDHHDNMSVVSLDISNLNASGSLSPSITGLLSLVSVSLQGNGFSGEFPRDIHKLPMLRFLNMSNNMFSGNLSWKFSQLKELEVLDVYDNAFNGSLPEGVISLPKIKHLNFGGNYFSGEIPPSYGAMWQLNFLSLAGNDLRGFIPSELGNLTNLTHLYLGYYNQFDGGIPPQFGKLTNLVHLDIANCGLTGPIPVELGNLYKLDTLFLQTNQLSGSIPPQLGNLTMLKALDLSFNMLTGGIPYEFSALKELTLLNLFINKLHGEIPHFIAELPRLETLKLWQNNFTGEIPSNLGQNGRLIELDLSTNKLTGLVPKSLCLGKRLKILILLKNFLFGSLPDDLGQCYTLQRVRLGQNYLTGPLPHEFLYLPELLLVELQNNYLSGGFPQSITSSNTSSKLAQLNLSNNRFLGSLPASIANFPDLQILLLSGNRFSGEIPPDIGRLKSILKLDISANNFSGTIPPEIGNCVLLTYLDLSQNQLSGPIPVQFSQIHILNYLNVSWNHLNQSLPKELRAMKGLTSADFSHNNFSGSIPEGGQFSIFNSTSFVGNPQLCGYDSKPCNLSSTAVLESQTKSSAKPGVPGKFKFLFALALLGCSLVFATLAIIKSRKTRRHSNSWKLTAFQKLEYGSEDIKGCIKESNVIGRGGSGVVYRGTMPKGEEVAVKKLLGNNKGSSHDNGLSAEIKTLGRIRHRYIVKLLAFCSNRETNLLVYDYMPNGSLGEVLHGKRGEFLKWDTRLKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFMQDNGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPFSSNNYSPPASQAMKENKFIHRFLR 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02846 937 Gene3D Ribonuclease Inhibitor 294 370 IPR032675 -
Gma08g02846 937 Gene3D Phosphorylase Kinase; domain 1 677 787 - -
Gma08g02846 937 ProSiteProfiles Protein kinase domain profile. 710 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02846 937 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 13 913 - -
Gma08g02846 937 Gene3D Transferase(Phosphotransferase) domain 1 788 936 - -
Gma08g02846 937 SUPERFAMILY RNI-like 86 431 - -
Gma08g02846 937 SUPERFAMILY L domain-like 371 632 - -
Gma08g02846 937 Gene3D Ribonuclease Inhibitor 371 638 IPR032675 -
Gma08g02846 937 ProSitePatterns Protein kinases ATP-binding region signature. 716 739 IPR017441 GO:0005524
Gma08g02846 937 Gene3D Ribonuclease Inhibitor 195 293 IPR032675 -
Gma08g02846 937 SMART serkin_6 710 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02846 937 PANTHER UNNAMED PRODUCT 13 913 - -
Gma08g02846 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Gma08g02846 937 SUPERFAMILY Protein kinase-like (PK-like) 706 920 IPR011009 -
Gma08g02846 937 Gene3D Ribonuclease Inhibitor 35 194 IPR032675 -
Gma08g02846 937 Pfam Protein kinase domain 712 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02846 937 SMART LRR_typ_2 493 517 IPR003591 -
Gma08g02846 937 SMART LRR_typ_2 371 393 IPR003591 -
Gma08g02846 937 SMART LRR_typ_2 346 370 IPR003591 -
Gma08g02846 937 SMART LRR_typ_2 274 298 IPR003591 -
Gma08g02846 937 SMART LRR_typ_2 153 177 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02846 Gma-Chr8 44655702 44660585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02846 24 912 Receptor kinase-like Gene Family AT5G65700 56.999 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma08g02846 Pkinase 6.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02846 - - gmx:100815103 1776.14