Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma08g02838 | atgtcacgcactgatacgatgacaacgacgatgactgcggatcttaatagaactggtccggtggaaagagacattgagcaggctattactgctttaaaaaaaggggcttacttgctcaagtatggaaggagagggaagcccaagttttgtccctttcggctttccaatgatgaatctgttttgatatggttctcagggaaagaagagaagcgccttaaactaactaatgtttctaggattatatctggacaacgcacgCCAATCTTTCAAAGATATCCGCGGCCTGAGAAGGAGTACCAGTCGTTTTCTCTCATTTACAATGATAGATCATTAGACTTGATTTGTAAGGATAAAGATGAAGCTGAGGTTTGGTTCAGTGGATTGAAAGCGTTAATTTCTCGCGGCCATCACTGGAAGTGGAGACCAGAGTCAAGAACTGATGGTATTCCGTCTGAAGCTAATAGTCCTCGAACATACACTAGAAGAAGTTCTCCCTTGAATTCTCCATTTGGTAGTAATGAAAGCTTGCAAAAGGATAGTGGGGATCATCTTCGCCTTCATAGCCCATATGAAAGCCCCCCTAAGAATGGTTTGGATAAAGCATTTTCTGATGTGGTTTATTATCCTATTCCTCCAATGGGTTTCTTCCCTCCAGATTCTGCCAGTGGTTCGGTCCACTCTGTGTCATCAGGAGGATCAGATAGCATGCATGGTCAAATGAAGACAATGCCTATGGATGCTTTTAGAGTTAGTCTATCAAGTGCTGTTAGCTCATCTAGCCAAGGTTCTGGTCATGATGATGGTGATGCCTTAGGGGATGTTTTCATTTGGGGGGAAGGCACAGGTGATGGTGTACTCGGTGGTGGGGCTCACCATGTTGGGAGTAATTTTGGTGTCAAAATGGACTCTCTGTTGCCCAAAGCCTTGGAATCAGCAGTAGTTCTTGATGTACAGAATATTGCTTGTGGTGGGGAACATGCTGCCATGGTGACCAAACAAGGTGAAGTTTTTTCCTGGGGGGGAGAATCAGGAGGAAGGCTTGGACATGGAGTTGATTCTGATGTTCCCCATCCAAAGCTTATTGAATCTCTAAGTAATACAAATATTGAACTTGTAGCTTGTGGGGAGTATCATACATGTGCTGTGACACTTTCTGGTGATCTTTATACATGGGGTGATGGCACTTACAATTATGGTCTTCTGGGGCATGGAAATCAGGTGAGCCACTGGGTCCCAAAAAGAGTAAATGGCCCTTTGGAGGGCATACATGTTTCATCTATTTCTTGTGGTCCATGGCACACTGCTGTTGTTACCTCTTCGGGGCAATTATTTACTTTTGGTGATGGTACATTTGGTGTTCTTGGTCATGGAGACCGAAAAAGTGTTTCCTTGCCTAGGGAAATAGAGTCCCTGAAAGGTCTTCGTACTGTGCAGGCTGCTTGTGGTGTTTGGCATACTGCTGCTGTTGTGGAGGTCATGGTTGGAAATTCAAGTTCCAGCAACTGCTCTTCAGGGAAGCTGTTTACATGGGGCGATGGAGACAAAGGTCGACTTGGACATGGTGACAAGGAATCAAAACTTGTTCCCACCCGTGTTGTGACTCTTGATGAACCTAATTTTTGTCAAGTTGCTTGTGGTCATAGTATGACTGTAGCACTTTCTAGATTAGGCCATGTCTATACAATGGGCAGTTGTGTCTATGGCCATTTGGGAAATACTCAAGCTGATGGGAAGCTACCAACCCCTGTCGAAGGAAAGCTTTCAAAGAGTTTTGTGGAGGAGATAGCTTGTGGTGCATATCATGTTGCAGTTTTAACTTCAAGGACTGAAGTTTTCACATGGGGGAAGGGTGCAAATGGTTGTTTAGGCCATGGGGATACTAATGATAGAAACACCCCAACATTAGTAGAAGCGCTGAAAGACAAACAAGTAAAAAGTATTGCTTGTGGTACAAATTTCACTGCAGCTATATGCCTGCATAAGTGGGTATCTGGTGTTGACCAGTCCATGTGTTCTGGCTGCCGTGTGCCATTCAACTTCAAAAGGAAACGCCACAATTGTTATAATTGTGGACTTGCTTTTTGTCATTCATGCAGTAATAAGAAATCTGTTAAGGCTTCAATGGCACCAAACCCCAACAAACCTTATCGTGTCTGTGATAATTGTTTTAATAAAATAAGGAAAACTACAGAAACCGATTCTTCATCTCAGGCTTCTATGAGCAGAAGAGGAAGTGTTAATCAGGGGTCACTTGAGTTTAATGGTAAGGATGATAAATTGGATTCCAGATCTCATAATCAACTTGCCAGGTTTTCTTCAATGGAATCCTTGAAACAAGTGGACAGCAGATCTTCAAAGAAAAACAAAAAATTGGAATTCAACAGTAGCCGTGTCTCACCTGCTCCAAATGGTGGTTCACAGTGGGGAGCAATGAATATTTCTAAATCTTTTAATCCTGTTTTTGGATCATCGAAGAAATTTTTTTCAGCTTCTGTTCCTGGGTCTAGAATTGTTTCCCGGGCAACATCCCCAATATCTAGACGACCTAGTCCACCCCGTTCAACTACTCCAACCCCAACACTGGGGGGACTTTCATCGCCAAAGATAGTTGTGGATGATGCTAAGAGAATCAATGATAACCTCAGTCAGGAGGTTGTTAAATTAAGATCACAGGTGGAAAACCTGACTCGGAAAGCCCAGCTTCAAGAAGTTGAGTTGGAAAGAACAACTAAACAGTTAAAAGAAGCAATAGCAATTGCAAGCGAAGAAACTGCCAAATGCAAAGCAGCAAAGGAAGTGATCAAGTCACTCACTGCCCAGTGGAAGGACATGGCTGAGAGGCTACCTGTAGGAGCATCTAGGAATGCCAGATCACCACCCTCTCTTGCTTCCTTTGGCTTAAATCCTGGTTCCAATGACCTTACTAATGCTTCCTTTGATCGATTGAATATTCAAGCAACAAGCCCAGAATCAGACTTAAATGGATCCACTAACCAGTTACTTTCAAATGGATCAAGCACCATCACCAACCGGAGTGCAGGTCACATTAAACACAGTCAATCAGATGCAACTAGCAGAAATGGGAGCAAAACAAAGGATAATGAGACTGAATGGGTTGAGCAAGATGAACCTGGTGTATATATTACTCTTACCTCCTTACCAGGAGGTGTAATAGATCTTAAAAGAGTTCGCTTCAGCCGGAAGCGGTTTAGTGAGAAACAAGCAGAACAATGGTGGGCTGAGAATCGGGCAAGAGTATATGAACAATACAACGTGCACATGATTGACAAGTCGACAATTGGCGTTGGGAGTGAGGACCTGGCTCATTGA | 3330 | 0.4 | MSRTDTMTTTMTADLNRTGPVERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLKLTNVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRGHHWKWRPESRTDGIPSEANSPRTYTRRSSPLNSPFGSNESLQKDSGDHLRLHSPYESPPKNGLDKAFSDVVYYPIPPMGFFPPDSASGSVHSVSSGGSDSMHGQMKTMPMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGAHHVGSNFGVKMDSLLPKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRVPFNFKRKRHNCYNCGLAFCHSCSNKKSVKASMAPNPNKPYRVCDNCFNKIRKTTETDSSSQASMSRRGSVNQGSLEFNGKDDKLDSRSHNQLARFSSMESLKQVDSRSSKKNKKLEFNSSRVSPAPNGGSQWGAMNISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLSSPKIVVDDAKRINDNLSQEVVKLRSQVENLTRKAQLQEVELERTTKQLKEAIAIASEETAKCKAAKEVIKSLTAQWKDMAERLPVGASRNARSPPSLASFGLNPGSNDLTNASFDRLNIQATSPESDLNGSTNQLLSNGSSTITNRSAGHIKHSQSDATSRNGSKTKDNETEWVEQDEPGVYITLTSLPGGVIDLKRVRFSRKRFSEKQAEQWWAENRARVYEQYNVHMIDKSTIGVGSEDLAH | 1109 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma08g02838 | 1109 | Gene3D | - | 503 | 666 | IPR009091 | - | |
| Gma08g02838 | 1109 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 609 | 660 | IPR000408 | - | |
| Gma08g02838 | 1109 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 441 | 492 | IPR000408 | - | |
| Gma08g02838 | 1109 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 667 | 739 | IPR013083 | - | |
| Gma08g02838 | 1109 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 1035 | 1090 | IPR013591 | - | |
| Gma08g02838 | 1109 | SUPERFAMILY | FYVE/PHD zinc finger | 661 | 731 | IPR011011 | - | |
| Gma08g02838 | 1109 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 427 | 437 | IPR000408 | - | |
| Gma08g02838 | 1109 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 386 | 440 | IPR000408 | - | |
| Gma08g02838 | 1109 | CDD | PH_PLC_plant-like | 23 | 133 | - | - | |
| Gma08g02838 | 1109 | PANTHER | INACTIVE PHOSPHOLIPASE C-LIKE PROTEIN 2 | 25 | 1095 | - | - |
Showing 1 to 10 of 51 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma08g02838 | - | - | gmx:100797527 | 2146.32 |
Showing 1 to 1 of 1 entries