Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02835 ATGGAAGaagtaactgagttgcagtctgaagaaaataaattgtctatggagaaaaataagaaaagaaggctcaaaacaccagcccagcttaaggccttggaagatttttataatgataacaaatatcccacggaggaaatgaaatcagaacttgccgatgagttagaattgacagaaaagcaaatatctggatggttttgccacagaagattgaaagataaaaaaatgttgaatgatgaagtatgtgctaatggacgacaagatcgttcaagtggtgtcattcaggatcgtggcagtggtctagtgcaggattcatgcggaagcactaaacatgttcactataggtatctggatcccaaagaggttgagagtcatggcctctataaccatggattttcagctgcagatataacctatggacacaaaaaccatcgttatgcagaaaatgatagtgcaacagataacacatcatctgagagtagctcatctttgcaagatcgattgctttgtcaaggacaggatccgtatgatatggagccttctagtcatgtaacacctaatggatctcttctgcctcccaataccaagggtgcaaataacatgggacataaaccatcaggatatttgaaagtgaagggagagatagagcatgctgctattactgctgttaaaaagcaattaggaaagcattatcgggaagatggtccactacttagtgttgaatttgatacaattcctcctgaggcatttgaatgtcaaattgcagatctagctaatgaagcatactatgctgcaaatcctgctcttccaaattctccagaagtctctgcagtgaaaaaacagtccagtctcagttctAGATATGATTCATATTTTACCAAAATCAGTTCCCAAGATTCACAAATGGTCAGAGGTGACTTTGGCTCCTTGCATGATTCTGATTTCCAGTATAAGAAATCCCACCATGATATAAATCAAAGGAGAAATTTTCAGAGTTTTACCAATCCTTTGCCTCACAAGAACTCTTGCCTGGATTTCAATGCAGACTCTACTGGGGAAGCATCTGCTTATAATAACACTAAAAATTGTAGAAAGGGTACTAAGCATGGTTTTGATGGGACGAGATATGACTCTGGTTCTAACCCCAGTGATCACTATGAAGAGAATAACCTAGTGGTTAACCAGACAGATTCTCTGCTACATGGCTATGAAAACAGCAACCTGAAGAATGTACAAAGGGGTGAATATGTGAAATCTAAACCTTCAAATTCAGTACATAAGTCTCAAGTTTACTTGGATACTGGAGAAAGAAGAGGGCTTAATAAAAGGATGGCAAAGGAAGAGAAGTTTGATGGGGATAGAAAGATAAAAAAACAATATCGTGATCCAGATGAAGTTAGGGTGCTTACAAATGAAATGACGGTTGCAAAGTGGGCTAAAGTTGATCCACTTGAACAATATGATGTTAAACAATCATCTGTTGCTGAGTTGGAACCAAGAAAAAGTCAAAGGTCTGCTGCAGAGATGCCATCTAGCTTTAGTGAGGATGAAACTGCTGAAACCAGTTCCTCAGCGGATTAA 1581 0.1777 MEEVTELQSEENKLSMEKNKKRRLKTPAQLKALEDFYNDNKYPTEEMKSELADELELTEKQISGWFCHRRLKDKKMLNDEVCANGRQDRSSGVIQDRGSGLVQDSCGSTKHVHYRYLDPKEVESHGLYNHGFSAADITYGHKNHRYAENDSATDNTSSESSSSLQDRLLCQGQDPYDMEPSSHVTPNGSLLPPNTKGANNMGHKPSGYLKVKGEIEHAAITAVKKQLGKHYREDGPLLSVEFDTIPPEAFECQIADLANEAYYAANPALPNSPEVSAVKKQSSLSSRYDSYFTKISSQDSQMVRGDFGSLHDSDFQYKKSHHDINQRRNFQSFTNPLPHKNSCLDFNADSTGEASAYNNTKNCRKGTKHGFDGTRYDSGSNPSDHYEENNLVVNQTDSLLHGYENSNLKNVQRGEYVKSKPSNSVHKSQVYLDTGERRGLNKRMAKEEKFDGDRKIKKQYRDPDEVRVLTNEMTVAKWAKVDPLEQYDVKQSSVAELEPRKSQRSAAEMPSSFSEDETAETSSSAD 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02835 526 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Gma08g02835 526 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 526 - -
Gma08g02835 526 SMART HOX_1 18 80 IPR001356 GO:0003677
Gma08g02835 526 SUPERFAMILY Homeodomain-like 16 79 IPR009057 -
Gma08g02835 526 MobiDBLite consensus disorder prediction 490 526 - -
Gma08g02835 526 MobiDBLite consensus disorder prediction 505 526 - -
Gma08g02835 526 CDD homeodomain 20 76 IPR001356 GO:0003677
Gma08g02835 526 MobiDBLite consensus disorder prediction 178 201 - -
Gma08g02835 526 MobiDBLite consensus disorder prediction 147 166 - -
Gma08g02835 526 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 526 - -
Gma08g02835 526 MobiDBLite consensus disorder prediction 150 166 - -
Gma08g02835 526 MobiDBLite consensus disorder prediction 7 22 - -
Gma08g02835 526 MobiDBLite consensus disorder prediction 1 22 - -
Gma08g02835 526 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Gma08g02835 526 MobiDBLite consensus disorder prediction 172 207 - -
Gma08g02835 526 Gene3D - 8 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02835 Gma-Chr8 44531636 44536005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02835 6 526 Homeobox Transcription Factor Family AT4G03250 39.259 3.69e-78 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gma08g02835 Homeodomain 3.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02835 - - gmx:100811885 1018.07