Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02812 ATGGAAGAAGAATGTGTTCATCAACAAAACGTGGCTGGTAATAAGTCCAATTTCCCGCTACAGCTGCTGAAGAAAAAGGATGAGGGACCACCACCATCACCACCGCCGAGCGCCGCCAAGGCCAAGCGACCACCGACGAAGGACAGACACACCAAGGTGGAGGGGCGGGGGCGGCGGATCCGGATGCCGGCGGCTTGCGCGGCGAGGGTGTTCCAGCTGACGCGCGAGCTCGGCCACAAGTCCGACGGTGAGACCATCGAGTGGCTGCTCCGGGAGGCCGAGCCCGCTGTCATCGCCGCCACCGGCACCGGCACCATCCCGGCGAACTTCACGTCGCTGAACATCTCCCTCCGCAGCTCCGGCTCCTCCCTCTCCTCCCCCTCCCACTACTTCCTCAACCGCCGGAACAATCTTTACAATCACAACAACCACCCCTTCGTCACAACAACACCCATATTTTCTTCTTCTGAATCGTGTTTTAAATCATACCCAAGTTTTAGTTTCGCGGAAGATTCTAAAAGGTCCTCTTTTTCCGACTCCTCTTTCGCGAATAACTATTATTCGCGAAAGAGGAGGCACGAGGTGATTTCGCACGTGGGAAGTTGTTGTTCGTCTCAGATGTGTACGGACTCCGTTCCCGCCATGATGGGTGGCGCTGATTCAGTTTGGGCCATTCCCTCTGTGGCTTCTTCTTCTGCGAGTGGCATTCCTTTTATGAATTTTGCTTCGCTGTTGACCGGTCAACACGTGGGTGGTGCAACGCTGAGTAGTGAAACCAACTTCAATGTGCTTGCAACGCTTAATGCGTATTCCGGCCAACAACATCAACATCGCCATGAAGGAGAAGAAACACACTACTAA 861 0.5459 MEEECVHQQNVAGNKSNFPLQLLKKKDEGPPPSPPPSAAKAKRPPTKDRHTKVEGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLREAEPAVIAATGTGTIPANFTSLNISLRSSGSSLSSPSHYFLNRRNNLYNHNNHPFVTTTPIFSSSESCFKSYPSFSFAEDSKRSSFSDSSFANNYYSRKRRHEVISHVGSCCSSQMCTDSVPAMMGGADSVWAIPSVASSSASGIPFMNFASLLTGQHVGGATLSSETNFNVLATLNAYSGQQHQHRHEGEETHY 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02812 286 MobiDBLite consensus disorder prediction 1 59 - -
Gma08g02812 286 PANTHER TRANSCRIPTION FACTOR TCP23 32 280 - -
Gma08g02812 286 Pfam TCP family transcription factor 46 144 IPR017887 -
Gma08g02812 286 MobiDBLite consensus disorder prediction 42 59 - -
Gma08g02812 286 ProSiteProfiles TCP domain profile. 46 100 IPR017887 -
Gma08g02812 286 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 32 280 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02812 Gma-Chr8 44311262 44312122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02812 45 226 TCP Transcription Factor Family AT1G35560 47.783 1.23e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma08g02812 TCP 2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02812 - - gmx:102664835 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02812 08 44311262 44312122 Gma08g02812 08 44311262 44312122 ECH