Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02796 ATGGGAAGACAAAGTCCTGGAAAATGGATCAGAAACTTACTTCTGGGGAAGAAATCATCATCGAAGTCCAAGTCTTCTAGAGAGAAAGATATTAATAAACCTTCAAGTTACAAGGATGTTCTGGTGGCGTCTTCCGAGGCATCAATGTCTGCTCCAACATCCGGAGCTAATGCTACTAAAGGAGTGCTATCAGAAAAGGAAGTAGTAAGCATATCATCAAATGATGGTGTAAATCTTTCAATTAGAGACAAACAGGACAATGCACAATCACTTGCTAATATTGGTTCTGGGGACCATCATGAGAAAATCAGGCAAATAGAAGCAGCTATAATAGTTCAGGCTGCTATTAGAGGCTATCAGGCGCGTGGGACATTTAAAACTCTCAAAGGTATCATACCTCTGCAATCTTATATTCGTGGCCAGTTGGTTCGACGACAAGCTATTTCTGCTTTATATTGTGTGAAGTCAATAGTTAAATTTCAAGCATTGGCTCGTGGTTACAAGGTTAGGCACTCAGATATTGGCCTTGCAGTCCAGAAATTTTTTAAGGATACTAAATTTCCGAATTCTGTTGGAGTAGATGCAACCACACAGGCAGCGAAGCTCTCAGATAATATCTTTGTTAACAAGCTTCTGGCTTCATCATCCTCTGCTGTTTCTCCAAATCTCAAATATAATGCTGGTGAACCTAACTTGGCTTGGGAGTGGCTCGAACGTTGGACAAAATCACACTTTTGGGTACCTCTTCGAGAAGTGCTGAAACCTGATTCAATATCTGATAAGAAAAATGGAAGTTGTCAAACAGTTGAAACTAGCAAGCGACAAGTTAAAAGAAATGCCAGGAAAGCACCTGCTGTGAGGGCTGGTGATGATTCAGTTTCAGATTCTAACAAACATAAACGGTATCCCAAAAAGGATTCAAACCTCCCATTGCATTCAGCTAAGGAACACCCACAAAAGGAAATTGAGAAAAAGAGTCCTAGAAAAACTCAAATTCAGAATGTTTTTGATAAATCTGAGGTTGCTCATGAGAAAAGAACTAACATCACAAGAATAGTTTCTGATCATGCAACAGTGAATGATGTTCAAGAGGAAGATGCTGATGCTCCTTCAAAGAAGTTGGAAGACTCGGCAGTGTCAGAGTCAAAACAGTTTGATGTTGAGAAAAGTCTAGGACAGCAAGCTGAAGAGAATGAAAATAATGAGTCATGTAATGATACTAATGCTCCCTTGCAATCTAGCTTGATGAATGGTAAAGATGGAGAATTCATTGAGGACTTGAATGATATAAATTCTAAGAATTTCCAGAGAAGAGCTTCCCTGCCTGCTAATTTTACAGATCATGAAAATCTGTTGCATAGTAACACTCCAAGACGGCCTAGTTATATGGCTCCAACTGAATCTACAAAAGCTAAGCTAAGAGGACATGGACAAGGCTCTCCAAGGTCTGTTAGCGATTTGGCAGATGTAAGTAGTGTCACCCGGCGGCTTTCACTTTCGTCTTCGCTTAATGGCAAGTATGGTTCATTCTCTCCGCGGTCAGATAGATTGTCTGCCTTGAGCAACAAGATAAGGACTGACAGATCTCTATCATCTTCAAGGGATGGCACAGATAAGTTGATGCAACCTAAGTGGAGAAGGTGA 1644 0.4045 MGRQSPGKWIRNLLLGKKSSSKSKSSREKDINKPSSYKDVLVASSEASMSAPTSGANATKGVLSEKEVVSISSNDGVNLSIRDKQDNAQSLANIGSGDHHEKIRQIEAAIIVQAAIRGYQARGTFKTLKGIIPLQSYIRGQLVRRQAISALYCVKSIVKFQALARGYKVRHSDIGLAVQKFFKDTKFPNSVGVDATTQAAKLSDNIFVNKLLASSSSAVSPNLKYNAGEPNLAWEWLERWTKSHFWVPLREVLKPDSISDKKNGSCQTVETSKRQVKRNARKAPAVRAGDDSVSDSNKHKRYPKKDSNLPLHSAKEHPQKEIEKKSPRKTQIQNVFDKSEVAHEKRTNITRIVSDHATVNDVQEEDADAPSKKLEDSAVSESKQFDVEKSLGQQAEENENNESCNDTNAPLQSSLMNGKDGEFIEDLNDINSKNFQRRASLPANFTDHENLLHSNTPRRPSYMAPTESTKAKLRGHGQGSPRSVSDLADVSSVTRRLSLSSSLNGKYGSFSPRSDRLSALSNKIRTDRSLSSSRDGTDKLMQPKWRR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02796 547 PANTHER IQ-DOMAIN 5-RELATED 1 544 - -
Gma08g02796 547 MobiDBLite consensus disorder prediction 355 419 - -
Gma08g02796 547 MobiDBLite consensus disorder prediction 21 35 - -
Gma08g02796 547 MobiDBLite consensus disorder prediction 1 37 - -
Gma08g02796 547 ProSiteProfiles IQ motif profile. 105 129 IPR000048 GO:0005515
Gma08g02796 547 MobiDBLite consensus disorder prediction 257 341 - -
Gma08g02796 547 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 544 - -
Gma08g02796 547 SMART iq_5 152 174 IPR000048 GO:0005515
Gma08g02796 547 SMART iq_5 104 126 IPR000048 GO:0005515
Gma08g02796 547 SMART iq_5 127 148 IPR000048 GO:0005515
Gma08g02796 547 MobiDBLite consensus disorder prediction 484 527 - -
Gma08g02796 547 MobiDBLite consensus disorder prediction 358 383 - -
Gma08g02796 547 MobiDBLite consensus disorder prediction 446 547 - -
Gma08g02796 547 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Gma08g02796 547 MobiDBLite consensus disorder prediction 292 331 - -
Gma08g02796 547 MobiDBLite consensus disorder prediction 446 463 - -
Gma08g02796 547 Pfam IQ calmodulin-binding motif 134 146 IPR000048 GO:0005515
Gma08g02796 547 Pfam IQ calmodulin-binding motif 107 122 IPR000048 GO:0005515
Gma08g02796 547 Pfam IQ calmodulin-binding motif 155 170 IPR000048 GO:0005515
Gma08g02796 547 Pfam Protein of unknown function (DUF4005) 453 523 IPR025064 -
Gma08g02796 547 MobiDBLite consensus disorder prediction 528 547 - -
Gma08g02796 547 MobiDBLite consensus disorder prediction 396 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02796 Gma-Chr8 43947319 43952431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02796 1 547 IQD Protein Family AT1G14380 33.833 2.04e-61 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02796 - - gmx:100800688 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02796 08 43947319 43952431 Gma08g02796 08 43947319 43952431 ECH
Gma08g02796 08 43947319 43952431 Gma06g01707 06 17208312 17218562 ECH
Gma08g02796 08 43947319 43952431 Gma04g01676 04 45580518 45587717 ECH
Gma08g02796 08 43947319 43952431 Gma05g00278 05 2504957 2512810 ECH
Gma08g02796 08 43947319 43952431 Gma17g00925 17 7894922 7902093 ECH