Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02791 ATGGAGCTTGCACCTGTGAAGTCTGAACTAAGTCCAAGGAGCCATAGGTTGCTCATGATAGATGGTAGTGAGGTTATTGGCACTAAGTGTGTCAAAAGGCGGCGAAGAGATTCATCTACGGCCGTGTTAGGTGGCAATGGACAACAAGGTGAACAGTTAGAAGAACAGAAGCAACTTGGTGGCCAATCAACTGCCACCACTGTGAAGAGAAGCTCAAGGTTCAGGGGTGTTAGCAGACACAGGTGGACTGGAAGGTTTGAAGCACATCTATGGGATAAAGGGACCTGGAATCCCACTCAGAAGAAGAAAGGAAAGCAAGTATATTTGGGAGCTTATAATGATGAAGAAGCTGCAGCTAGAGCTTATGATTTGGCTGCACTCAAGTACTGGGGAATATCAACTTTCACAAATTTTCCTGTATCTGATTATGAGAAAGAAATTGAGATAATGAAAACTGTAACCAAAGAAGAATATCTTGCTTCATTGAGAAGGAGGAGCAGTGGTTTTTCCAGAGGTGTATCGAAGTATAGAGGAGTAGCAAGGCATCATCACAATGGAAGATGGGAAGCAAGGATTGGGAGAGTGTTCGGTAACAAGTACCTCTACCTTGGGACTTACAGTACACAAGAAGAAGCAGCTCGCGCATATGACATTGCAGCAATTGAATACAGAGGCATAAATGCAGTGACAAACTTTGACTTGAGCACCTACATAAGATGGCTAAGACCGGGAACACATCCTACTGCTTCTCATGATCAAAAGCCTAGCACTGATGCTCAACCTTTTGCAACCTCTAACTCCATGCAAGCAAGAGGGAACATTGAGGTATCCAACTCCAACAAGAATTCATTCCCCTCAGGTAAATTGGACAGTACCAAGAAGCGAGACTTTTCCAAGTACATGAACCCTTTGAGTCCATGCAACAAGCCATCTTCCCCAACAGCATTAGGACTTCTCCTAAAATCCTCAGTGTTTAGAGAACTGATGCAGAGAAATCTGAACTCTTCTAGTGAAGAAGCTGAAGAAGTTGAATTGAAATATCCACATGAGGGCAATGATGGAGTTGGAGGGATTTATGATAATGAAAACACCAATAACTCTTACTTTTGCTCTTCTAATATCAGCAGATTACCTAACTTGGAGTCATCAGAAGAGAGTCCATTGCCTATGTATCATGGAACTGTGCAATCACTATGGAATAGTGCTTTCAACATGTCTAACTGA 1224 0.4273 MELAPVKSELSPRSHRLLMIDGSEVIGTKCVKRRRRDSSTAVLGGNGQQGEQLEEQKQLGGQSTATTVKRSSRFRGVSRHRWTGRFEAHLWDKGTWNPTQKKKGKQVYLGAYNDEEAAARAYDLAALKYWGISTFTNFPVSDYEKEIEIMKTVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGTHPTASHDQKPSTDAQPFATSNSMQARGNIEVSNSNKNSFPSGKLDSTKKRDFSKYMNPLSPCNKPSSPTALGLLLKSSVFRELMQRNLNSSSEEAEEVELKYPHEGNDGVGGIYDNENTNNSYFCSSNISRLPNLESSEESPLPMYHGTVQSLWNSAFNMSN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02791 407 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 401 - -
Gma08g02791 407 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Gma08g02791 407 PRINTS Ethylene responsive element binding protein signature 215 235 IPR001471 GO:0003700|GO:0006355
Gma08g02791 407 ProSiteProfiles AP2/ERF domain profile. 175 233 IPR001471 GO:0003700|GO:0006355
Gma08g02791 407 MobiDBLite consensus disorder prediction 275 294 - -
Gma08g02791 407 Gene3D AP2/ERF domain 72 141 IPR036955 GO:0003700|GO:0006355
Gma08g02791 407 Gene3D AP2/ERF domain 174 235 IPR036955 GO:0003700|GO:0006355
Gma08g02791 407 SUPERFAMILY DNA-binding domain 174 235 IPR016177 GO:0003677
Gma08g02791 407 Pfam AP2 domain 174 225 IPR001471 GO:0003700|GO:0006355
Gma08g02791 407 Pfam AP2 domain 72 131 IPR001471 GO:0003700|GO:0006355
Gma08g02791 407 ProSiteProfiles AP2/ERF domain profile. 73 139 IPR001471 GO:0003700|GO:0006355
Gma08g02791 407 CDD AP2 174 235 IPR001471 GO:0003700|GO:0006355
Gma08g02791 407 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 401 - -
Gma08g02791 407 SMART rav1_2 73 145 IPR001471 GO:0003700|GO:0006355
Gma08g02791 407 SMART rav1_2 175 239 IPR001471 GO:0003700|GO:0006355
Gma08g02791 407 Coils Coil 326 346 - -
Gma08g02791 407 SUPERFAMILY DNA-binding domain 72 141 IPR016177 GO:0003677
Gma08g02791 407 MobiDBLite consensus disorder prediction 41 71 - -
Gma08g02791 407 MobiDBLite consensus disorder prediction 36 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02791 Gma-Chr8 43894178 43896952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02791 69 237 AP2-EREBP Transcription Factor Family AT5G57390 69.822 2.27e-83 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gma08g02791 AP2 5.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02791 - - gmx:100799621 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02791 08 43894178 43896952 Gma08g02791 08 43894178 43896952 ECH