Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02781 ATGGCTGGTGAGAAGCTGCATGAGGGTTCAAGCATGACACTTTTGCTCCAAAAAGAAAGGCTTACATGCTCCCCTGAACTTATTCGATCTTTTTGGGTTCAAAACTCTGAATCTTCTTTTCAAGGTTCAAAATCCTTGGCTAATGTTGTGAATGTCACGCAAAGGCCCTTCTTTCAAGGGCTTGAGAAAGAAGAGAACGGTGAGGATGAGGACTTTGGGGTGTGCCTAAATCAACCCGGTAAGAAAAGGAGGCTCACAAGCAAACAAGTGCAGTTCCTTGAAAGTAACTTCGAGGTTGAAAACAAGCTTGAACCCGAAAGGAAGGTCCAACTTGCCAAAGAACTTGGCATGCAACCAAGGCAAGTTGCCATATGGTTCCAAAACCGTAGGGCAAGGTTCAAGACAAAACAGCTTGAGAAAGACTATGGTGTGTTGAAAGCTAGCTATGACGTACTCAAAAGGGACTATGACAATCTCCTTCAGGAGAGTGATAAGTTAAAGGAAGAGGTTAATTCTCTCAAGACCAGATTGATTCCCAGAGAGCAAGAGGAACAGAATTTGGATGATACTTCCTGTGATGCTGTCAACTCACAGCATAAAGAGCAGAAAGATTTAATCACAAACACAGTTTCAGAAAATGGATCAAAAGTGCCACTTCCTGTTACGGTAACAAGCAAACAGGAAGATGCTAATTCAGCTAAAAGTGATGTTCTTGATTCGGATAGTCCACATTTCACTGATGGAAACCAATTCTCACTTATGGAGCCTGCAGATTCCTCCCATGCCGTCGAACCAGACCACTCTGCTTTCTCGCAAGACGAAGAAGACATCCTCAGCCAAAACATCTTGACCATGCCGTTCTTACCAAAGGTTGAAGATGTCTGCTATGATGAACCACATGAAGATTCTTGCAGCTTTCGGTTCCCAGTTGAAGATCAAACCTTCTGTTTTTGGTCTTATTGA 963 0.4309 MAGEKLHEGSSMTLLLQKERLTCSPELIRSFWVQNSESSFQGSKSLANVVNVTQRPFFQGLEKEENGEDEDFGVCLNQPGKKRRLTSKQVQFLESNFEVENKLEPERKVQLAKELGMQPRQVAIWFQNRRARFKTKQLEKDYGVLKASYDVLKRDYDNLLQESDKLKEEVNSLKTRLIPREQEEQNLDDTSCDAVNSQHKEQKDLITNTVSENGSKVPLPVTVTSKQEDANSAKSDVLDSDSPHFTDGNQFSLMEPADSSHAVEPDHSAFSQDEEDILSQNILTMPFLPKVEDVCYDEPHEDSCSFRFPVEDQTFCFWSY 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02781 320 CDD homeodomain 79 137 IPR001356 GO:0003677
Gma08g02781 320 Coils Coil 149 176 - -
Gma08g02781 320 Gene3D - 75 141 - -
Gma08g02781 320 MobiDBLite consensus disorder prediction 201 249 - -
Gma08g02781 320 PRINTS Lambda-repressor HTH signature 107 116 IPR000047 GO:0003677
Gma08g02781 320 PRINTS Lambda-repressor HTH signature 116 132 IPR000047 GO:0003677
Gma08g02781 320 ProSitePatterns 'Homeobox' domain signature. 111 134 IPR017970 GO:0000981|GO:0006355
Gma08g02781 320 Pfam Homeobox associated leucine zipper 136 177 IPR003106 GO:0006355|GO:0043565
Gma08g02781 320 ProSiteProfiles 'Homeobox' domain profile. 76 136 IPR001356 GO:0003677
Gma08g02781 320 SUPERFAMILY Homeodomain-like 73 138 IPR009057 -
Gma08g02781 320 Pfam Homeodomain 81 134 IPR001356 GO:0003677
Gma08g02781 320 MobiDBLite consensus disorder prediction 177 249 - -
Gma08g02781 320 SMART HOX_1 78 140 IPR001356 GO:0003677
Gma08g02781 320 PANTHER HOMEOBOX LEUCINE ZIPPER FAMILY PROTEIN 1 320 - -
Gma08g02781 320 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 320 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02781 Gma-Chr8 43666315 43668420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02781 42 177 Homeobox Transcription Factor Family AT3G01470 54.015 6.52e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma08g02781 Homeodomain 2.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02781 - K09338 gmx:100804328 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02781 08 43666315 43668420 Gma08g02781 08 43666315 43668420 ECH