Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02757 ATGAAGAGGTCCAGGGATGATTCTTACACGAGTTCACAACCCAAACGGCCCAAAGGGTCTTCTAGAGAGGAAGAACCCTCCGGGCAATCACAGATGACGACTGGTGATGGTCAGATACCAACCACCAAAGATGCCTTGGCGTTTCTCAAGGCAGTAGAGGACGCGTTTCAAGATAAGAGGGAAAAGTATGATTACTTTATGGTAATCATGAAGGATTTCAAGGCTCAAAGAATTGATACAATAGGTGTCATGGAAAGAGTGGAGGAGCTGTTTAAAGGGCACAAAGATCTAATTTTGGGGTTTAACACCTTCTTGCCAAAGGGATATAAAATTATACTTCCATTGGAGGATGAGCAACCTCCCCAAAAGAAGCTCATTGAATTGAAAGAAGAAGCCATAAATTTTGTGGGCAAGATTAAGGCTCGTTTTCATGACAATGACCGTGTTTATAAGTCATTTCAAAACATATGTATGTGCAGAAAGGAAACCAAGTCTATCACTGAGATTTACCAGGAGGTTTCTGCACTTTTCCAGGGCCATGCAGATCTTCTTGAGGAGTTTAATCATTTTCTTCCTGATATACCAGGAACTACCTCTACTCAGTACGCTTCTGTTCAAAATTCTCTCCTTCATGATAGGAGCTCTGCCATGCCAACAATTAGGCAAATGCATGTTGAAAAGAGAGAAAGGAACATAGCTTCACATGGGGATCATGACCTCAGTGCTGACCATCCTGATCCAGAACTTGACAGTTGTTTGATGATGGCTGATAAGGATCAGAGGAGGCGTGGTGCAAAGGAAAATGACTGTAGAAAAGGGAGAGACAGAAGAGAACAGGAAAGGGATGATGGGGATTATGATCATGATGGTAGTAGGGAGCATTTATCTCACAAACGGAAATCTGGTTGCAGGGCTGAAGACTCTGGTGCTGAAAGCATGCACCCTATCTCATATGCTTGTGAGGATATAAGTTCTTTGAAAAGTATGTGTAGTCCAGTGTTTGGTTACCTTGAAAAAGTCAAGGAGAAATTACAAAATCCTGAGGTTTTCCAGGAATTTTTGAAGTACCTATATATCTACAGCATGGAAATAATTACCAGACAAGAATTGCAATCATTGGTGGGCAATATACTGGGAAAATATGCAGATCTTATAGAGGGATTTGATGAATTCTTGGATCAATGTGAGAAAAATGAGATCTTTTGGCATGAAGGACATGGACCTAAACCAATGAAAGTAGAGGACAGGGATCAGGATAGGGATGACAAGATGGAAAAAAGGGATCGCAAATGCCTAGAAAGGGTCAAGTCCAATGCAACTGCTAACAAGGATGTTTCAGTTCCTAAGATGTCTCTGTATGCCAGCAAGGATAAGTATGCAATGAAGCCTATAAATGAGCTGGACCTTTCTAACTGTGAACAATGCACTCCTAGTTACCGTCTTCTACCAAAACAATACCCAATACTGCCAGCTAGCGACAGAACAGAACTTGATGCAGAGGTATTGAATGATAACTGGGTTTCTGTTACTTCTGGCAGTGAGGACTATTCATTTAAGCACAGGTACAAAAACCAATATGAGGATAGCATGTTTAGATGTGAAGATGACAGGTATGAACTTGATATGCTGTTAGAGTCTGTAAATGCGACAACTAAGCAAGTTGAAGATTTCTTAGAAAAGATTAATGCTAATATAATTAAAGGATACTGTCCAATTCGTATTGAGGAGCACTTAACAGCTCTAAATCTTAGATGCATCGAACAAATATATGGTGATCATGGGCTTGATGTAGTGGATGCGCTAAAGAAGAATGCACTTTTAGCTTTGCCAGTCATATTAACCCGCTTGAAGCAGAAACAGGATGAGTGGGCAAGGAGCCGTGCTGATTTTAATAAAGTTTGGTCTGAAACATATGCAAAGTACCATCACAAATCACTTGATCAATGTAATGGTACTGCAATTGCCAAGGGTCATGGTGGCCATCATGTTGGATTTACCATAATGAATCCTAAGAATTTCAACAACAATACAAATGGAAATGAGAGTGTTCTATTAGAAGAATCAAATTCCTGCAAACAACGGCAAACAATTGGGGATAATAAGGTTGAAGAGGATAATTCTCTTGATTCAGACTGCTCTGCACATAAAACTGAGACTGAAACCTTTGGAAGTAGTACACAGCATGGTCAAATGCATTTAATTGCAACCAATCTTGATGAAATATCAAGAGCCAAAAAGCAAGATCATTCAATTGATCGGTTGGTGAATGCTAATGTCTCAATGTCCTCTGGTATGGAGCAAAGTAATAGAAGAACGAATGTGGGTAATGCATCAGGACTTACTGCTACTCCTCCATCAAGACCTGGTAATGTTTCTAATGAGGGAGGGCTTGATTTACCTTCATTGGAGGAGACATTGTCACAATCTGTCTCGCAAGAGGAAGTTGCTGATCATGACCACAATGATATCCTTGGTAGAACCTTGAATGTCCCTAAACACTTAGGCCGTGACAGGGGATTGGGATTTGAAGTGACACAGAAGATTAATGTCTCACTCCAACAAATGCCACTATCTATTACAAATGGGCATGTGCAACAAATCCAGAAGGGCTTGGTTGACCTCAAAAAGGGAACGAACAAGTTGGAAATGGAAGTGCAAATGCAAATGAATAAGGAGCCACAGGAAGAAGGTCTGGGTGGCCTAAGTGGTATAAATAGTTGCACACCTACAGCTACTCATATACCAGAGCAAAATTTTAGACACCTATAG 2769 0.4056 MKRSRDDSYTSSQPKRPKGSSREEEPSGQSQMTTGDGQIPTTKDALAFLKAVEDAFQDKREKYDYFMVIMKDFKAQRIDTIGVMERVEELFKGHKDLILGFNTFLPKGYKIILPLEDEQPPQKKLIELKEEAINFVGKIKARFHDNDRVYKSFQNICMCRKETKSITEIYQEVSALFQGHADLLEEFNHFLPDIPGTTSTQYASVQNSLLHDRSSAMPTIRQMHVEKRERNIASHGDHDLSADHPDPELDSCLMMADKDQRRRGAKENDCRKGRDRREQERDDGDYDHDGSREHLSHKRKSGCRAEDSGAESMHPISYACEDISSLKSMCSPVFGYLEKVKEKLQNPEVFQEFLKYLYIYSMEIITRQELQSLVGNILGKYADLIEGFDEFLDQCEKNEIFWHEGHGPKPMKVEDRDQDRDDKMEKRDRKCLERVKSNATANKDVSVPKMSLYASKDKYAMKPINELDLSNCEQCTPSYRLLPKQYPILPASDRTELDAEVLNDNWVSVTSGSEDYSFKHRYKNQYEDSMFRCEDDRYELDMLLESVNATTKQVEDFLEKINANIIKGYCPIRIEEHLTALNLRCIEQIYGDHGLDVVDALKKNALLALPVILTRLKQKQDEWARSRADFNKVWSETYAKYHHKSLDQCNGTAIAKGHGGHHVGFTIMNPKNFNNNTNGNESVLLEESNSCKQRQTIGDNKVEEDNSLDSDCSAHKTETETFGSSTQHGQMHLIATNLDEISRAKKQDHSIDRLVNANVSMSSGMEQSNRRTNVGNASGLTATPPSRPGNVSNEGGLDLPSLEETLSQSVSQEEVADHDHNDILGRTLNVPKHLGRDRGLGFEVTQKINVSLQQMPLSITNGHVQQIQKGLVDLKKGTNKLEMEVQMQMNKEPQEEGLGGLSGINSCTPTATHIPEQNFRHL 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02757 922 SUPERFAMILY PAH2 domain 332 396 IPR036600 GO:0006355
Gma08g02757 922 Gene3D Paired amphipathic helix 44 106 IPR036600 GO:0006355
Gma08g02757 922 Gene3D Paired amphipathic helix 325 397 IPR036600 GO:0006355
Gma08g02757 922 SUPERFAMILY PAH2 domain 41 107 IPR036600 GO:0006355
Gma08g02757 922 MobiDBLite consensus disorder prediction 258 309 - -
Gma08g02757 922 MobiDBLite consensus disorder prediction 698 716 - -
Gma08g02757 922 PANTHER SIN3B-RELATED 1 648 IPR039774 GO:0003714
Gma08g02757 922 MobiDBLite consensus disorder prediction 760 799 - -
Gma08g02757 922 ProSiteProfiles PAH domain profile. 326 395 IPR003822 GO:0006355
Gma08g02757 922 ProSiteProfiles PAH domain profile. 124 194 IPR003822 GO:0006355
Gma08g02757 922 MobiDBLite consensus disorder prediction 698 730 - -
Gma08g02757 922 MobiDBLite consensus disorder prediction 1 23 - -
Gma08g02757 922 SMART hdac_interact2seq4b 471 571 IPR013194 -
Gma08g02757 922 Pfam Sin3 family co-repressor 473 564 IPR013194 -
Gma08g02757 922 MobiDBLite consensus disorder prediction 24 39 - -
Gma08g02757 922 MobiDBLite consensus disorder prediction 406 428 - -
Gma08g02757 922 Gene3D Paired amphipathic helix 131 192 IPR036600 GO:0006355
Gma08g02757 922 ProSiteProfiles PAH domain profile. 39 108 IPR003822 GO:0006355
Gma08g02757 922 SUPERFAMILY PAH2 domain 130 193 IPR036600 GO:0006355
Gma08g02757 922 Pfam Paired amphipathic helix repeat 61 105 IPR003822 GO:0006355
Gma08g02757 922 Pfam Paired amphipathic helix repeat 348 392 IPR003822 GO:0006355
Gma08g02757 922 Pfam Paired amphipathic helix repeat 149 191 IPR003822 GO:0006355
Gma08g02757 922 PANTHER PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 2 ISOFORM X1 1 648 - -
Gma08g02757 922 MobiDBLite consensus disorder prediction 760 790 - -
Gma08g02757 922 MobiDBLite consensus disorder prediction 1 39 - -
Gma08g02757 922 MobiDBLite consensus disorder prediction 258 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02757 Gma-Chr8 43327877 43335600 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02757 41 120 WRKY Transcription Factor Family AT4G12020 55.000 8.31e-19 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma08g02757 Sin3_corepress 2.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02757 K11644 - gmx:106799801 1833.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02757 08 43327877 43335600 Gma08g02757 08 43327877 43335600 ECH