Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02752 ATGGACTCTAACAGCGTCGTTTCTTGGCCGAGGTTGCCGGAAAACATCGACGGTTTCGGTATCAAACAGAAACAATCCGAAGAGGTTCATGTTTTAGCCGTTGATGACAGTATCGTTGATCGCAAAGTCATCGAACACTTGCTCAAAGTCTTAGCTTGTAAAGTTACTGCTGTGGATAGTGGGCTGAGAGCACTGCAATTGCTTGGACTATTGGACGAGCAGAAAATCCCCTCTGAAACTAATGGTTTTGGGGGTTTAAAGGTGGATCTAATCATCACAGACTATTGTATGCCCGGAATGACCGGTTATGAATTACTCAAGAAAATTAAGGAATCCTCCAGTTTCAAGGAAACTCCTGTGGTGATTATGTCCTCCGAAAATGTTTTGCCACGCATAGACAGATGTTTGGAGGAGGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAGTTATCAGATGTGAAGCGTTTGAAGGATTTCATGACAACAAAGGAGGTTATAAGGGGTGAATTAAGCCAAGAAGAAAGGGAAGGGATCAACAAGAGGAAGCTATTAGACACCTCTGATGTGTCGCCATCATCACCACCGTCCATTTCCTCATCACCACTCCCATCGTCACCCAGCTCAGTGATTGATTCTCCAATCAGACGGCTTAAAATGACCGGCACTGATTGA 672 0.4464 MDSNSVVSWPRLPENIDGFGIKQKQSEEVHVLAVDDSIVDRKVIEHLLKVLACKVTAVDSGLRALQLLGLLDEQKIPSETNGFGGLKVDLIITDYCMPGMTGYELLKKIKESSSFKETPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLKDFMTTKEVIRGELSQEEREGINKRKLLDTSDVSPSSPPSISSSPLPSSPSSVIDSPIRRLKMTGTD 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02752 223 Pfam Response regulator receiver domain 31 153 IPR001789 GO:0000160
Gma08g02752 223 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 213 IPR045279 GO:0009736
Gma08g02752 223 SUPERFAMILY CheY-like 29 156 IPR011006 -
Gma08g02752 223 SMART REC_2 29 157 IPR001789 GO:0000160
Gma08g02752 223 MobiDBLite consensus disorder prediction 176 223 - -
Gma08g02752 223 CDD REC_typeA_ARR 31 156 - -
Gma08g02752 223 Gene3D - 29 194 - -
Gma08g02752 223 ProSiteProfiles Response regulatory domain profile. 30 161 IPR001789 GO:0000160
Gma08g02752 223 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 10 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02752 Gma-Chr8 43218782 43220435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02752 1 215 Response Regulator Gene Family AT1G59940 54.812 4.21e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma08g02752 Response_reg 1.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02752 K14492 - gmx:100305926 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02752 08 43218782 43220435 Gma08g02752 08 43218782 43220435 ECH