Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02750 ATGTTCCCCCTCTTCCTCTCCCTATCCTTCTTTCCCTTGATCCAAGCCCAGCTCACCACCAACTACTACCAAAAAACCTGTCCCAAATTCTACGACATCGTCCGAAAAGCCGTCACCGACAAGCAGCTCTcgacgccgaccaccgccggcgccacgctccgcctcttcttccacgactgcatggttggcggctgcgacgcctccgtcctcgtcacctccgactccttcaacaaggcggagcgtgacgcagccgtcaacctccccctctcgggggacgggttCGACGCAGTGGCACGTGCCAAGGGGGCACTCGAGCTCGAGTGCCCTGGCATTGCCTCCTGCGCCGACACCCTCGCAGCGGCCGCACACAACCTCGTTATTGCGGCCGGCGGCCCCGCCTTCGAGCTCCGCCTCGGCCGAAAAGACTCCCTGGAGTCCAAAGCCACAGACCCCGAAAACCAATTCCCCTTACCAACCATGTCAATGTCGGAAGTCATAAAAATCTTCACATCCAAAGGTTTTTCGGTTCAAGAAATGGTGGCTCTGGTTGGTGCACACACCATAGGGTTATCCCACTGCAACCAATTTTCCCAAAGGCTCTTCAAATTTAACAAGAGTTCCGACATTGACCCTGCGTATAACCCTGAATACGCTGCGGGGTTGAAGAAACTGTGTGAAAATTACACAAAGGACCCTTCCATGTCAGCGTTTAACGATGTGATAACTCCGACGAAGTTTGATAACATGTATTACAAGAACTTGCGGAAAGGGATGGGGTTGTTGGCCACTGATAGCGCCATGTTTGGTGATTCCAGAACGAGGCCCTTCGTTGACACGTACGCGGAGGACGAAAATAAGTTCTTTCAGGATTTCGCACGTGCCATGGAAAAGCTTAGTGTTTTGCATGTTAAGACTGGTACAAAAGGAGAGGTGCGGTCGAGGTGTGACTCTTTCAACACGCTTAGTTATTGA 972 0.43 MFPLFLSLSFFPLIQAQLTTNYYQKTCPKFYDIVRKAVTDKQLSTPTTAGATLRLFFHDCMVGGCDASVLVTSDSFNKAERDAAVNLPLSGDGFDAVARAKGALELECPGIASCADTLAAAAHNLVIAAGGPAFELRLGRKDSLESKATDPENQFPLPTMSMSEVIKIFTSKGFSVQEMVALVGAHTIGLSHCNQFSQRLFKFNKSSDIDPAYNPEYAAGLKKLCENYTKDPSMSAFNDVITPTKFDNMYYKNLRKGMGLLATDSAMFGDSRTRPFVDTYAEDENKFFQDFARAMEKLSVLHVKTGTKGEVRSRCDSFNTLSY 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02750 323 PANTHER PEROXIDASE 6 9 322 - -
Gma08g02750 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Gma08g02750 323 Gene3D - 21 319 - -
Gma08g02750 323 SUPERFAMILY Heme-dependent peroxidases 17 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 ProSiteProfiles Plant heme peroxidase family profile. 17 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 PRINTS Plant peroxidase signature 27 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 PRINTS Plant peroxidase signature 51 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 PRINTS Haem peroxidase superfamily signature 49 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 Pfam Peroxidase 34 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 Gene3D Peroxidase, domain 2 156 298 - -
Gma08g02750 323 PANTHER - 9 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma08g02750 323 CDD secretory_peroxidase 17 318 IPR033905 GO:0004601|GO:0042744
Gma08g02750 323 ProSitePatterns Peroxidases active site signature. 49 60 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02750 Gma-Chr8 43170163 43171134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02750 5 319 Peroxidase AT5G40150 55.873 2.40e-133 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02750 K00430 - gmx:100781063 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02750 08 43170163 43171134 Gma08g02750 08 43170163 43171134 ECH
Gma08g02750 08 43170163 43171134 Gma19g00121 19 1259123 1260325 ECH