Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02742 ATGAATGCGGAACCTCCGCTGCCGCCGGCGCTCCTCATGTCGGTTTCCTGCCTCTCCGACTACGACCTCCTCTGTGGCGAGGACACCTCCGGAGTCCTCTCCGGAGAGTCGCCGGAGTGCTCCTCATCCGACATCGGCTCCTCACCACTTCCGCCGTCACCTCCGCCGTCGCCGACGATGACGGAGGATTGTTATTCCATCGCGAGCTTCATCGAGCACGAGCGCAACTTCGTCCCCGGATTCGAGTACCTGTCGAGGTTCCAATCTCGCTCCCTCGACGCCAACGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTACACGCGTATTATGGCTTTCAGCCTTTGACGGCGTACCTCGCCGTCAACTATATGGATCGGTTTTTGGATTCTAGCCAGTTGCCGGAAACAAATGGGTGGCCTCTGCAACTTCTATCTGTTGCATGCTTGTCTTTGGCAGCAAAAATGGAGGAACCTCTTGTTCCATCTCTCTTGGACCTTCAGATAGAAGGTGCCAAGTACATATTTGAACCGAGAACAATTCGTAGGATGGAGCTACTTGTTCTGGGTGTCTTGGATTGGAGGCTAAGATCAGTAACCCCACTTTGCTTCCTCGTTTTCTTTGCGTGCAAAGCAGATTCAACTGGAACTTTTACCCGGTTCCTCATTTCCCGGGCTACAGAAATCATCGTATCTAATATCCAAGAGGCTAGCTTTCTTGCTTACAGGCCATCATGCATTGCTGCTGCAGCCATACTCACTGCAGCTAATGAAATTCCTAATTGGTCTGTGGTTAAGCCCGAGCAAGCTGAGTCCTGGTGTCAGGGAATAAGAAAAGAAAAAGTAATAGGGTGCTACCAGTTGATGCAAGAACTTGTGATTAACAATAACCAAAGGAAACTCCCTACTAAAGTGTTGCCGCAGCTGCGAGTAACAACTCGGACCCGAATGAGGTCAAGTACTGTCTCATCATTCTCATCAACATCATCATCATCCTCTTCAACCTCCTTCTCCTTGTCTTGTAAGAGGAGGAAATTAAATAATCGTTTGTGGGTAGATGATGAGAAAGGAAACTCCGAGTAA 1083 0.4968 MNAEPPLPPALLMSVSCLSDYDLLCGEDTSGVLSGESPECSSSDIGSSPLPPSPPPSPTMTEDCYSIASFIEHERNFVPGFEYLSRFQSRSLDANAREESVAWILKVHAYYGFQPLTAYLAVNYMDRFLDSSQLPETNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQIEGAKYIFEPRTIRRMELLVLGVLDWRLRSVTPLCFLVFFACKADSTGTFTRFLISRATEIIVSNIQEASFLAYRPSCIAAAAILTAANEIPNWSVVKPEQAESWCQGIRKEKVIGCYQLMQELVINNNQRKLPTKVLPQLRVTTRTRMRSSTVSSFSSTSSSSSSTSFSLSCKRRKLNNRLWVDDEKGNSE 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02742 360 SMART cyclin_7 102 190 IPR013763 -
Gma08g02742 360 SUPERFAMILY Cyclin-like 200 301 IPR036915 -
Gma08g02742 360 PANTHER CYCLINS 22 345 IPR039361 -
Gma08g02742 360 SUPERFAMILY Cyclin-like 67 196 IPR036915 -
Gma08g02742 360 SMART Cyclin_C_2 199 334 IPR004367 -
Gma08g02742 360 ProSitePatterns Cyclins signature. 97 128 IPR006671 -
Gma08g02742 360 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 22 345 - -
Gma08g02742 360 CDD CYCLIN 103 189 IPR013763 -
Gma08g02742 360 Pfam Cyclin, C-terminal domain 199 310 IPR004367 -
Gma08g02742 360 MobiDBLite consensus disorder prediction 35 59 - -
Gma08g02742 360 Pfam Cyclin, N-terminal domain 68 196 IPR006671 -
Gma08g02742 360 Gene3D - 80 197 - -
Gma08g02742 360 Gene3D - 69 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02742 Gma-Chr8 43023256 43028145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02742 11 359 Core Cell Cycle Gene Families AT1G70210 61.080 7.52e-134 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02742 K18810 - gmx:100778578 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02742 08 43023256 43028145 Gma08g02742 08 43023256 43028145 ECH