Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02732 ATGCCATTTGGTTTGGTCTCAGCATGGAACAAGCGTCGAAGAAGCATGTCTCACGATCATTCAGACCCTTGGATTTATAAACCTGCAGAGTTTTGGCAACTTGAAGATCAAACACCACAACCTACAAAAAGGAGGCATAGATCATCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACATGTTCATTAAGTGATGATAATCTGCTTGGAAAAGGAGGATTTGGCAGGGTCTACAGGGCCACTTTGAAGTCAGGAGAGGTTGTAGCAATAAAGAAAATGGAGCTGCCAGCAATTAAAGCAGCAGAAGGGGAGCGCGAATTCCGCGTAGAGGTTGACATATTGAGCAGACTTGACCACCCAAATCTTGTTTCTTTGATAGGATACTGTGCTGATGGGAAGCATAGATTCTTAGTTTATGATTATATGCATAATGGGAACCTGCAAGATCATCTGAATGGTAAGTCATGTACTCAAAATCCACATTATGTGAAAATTTTCTTACATCCAACTTCTATTAAACAACGTCTAATTTTAGGAATTGGAGAAAGAAAAATGGATTGGCCACTGAGACTCAAAGTGGCATTTGGAGCTGCAAAAGGGCTTGCTTATCTTCATTCAAGTTCTTGTCTTGGAATTCCTATTGTTCATAGAGATTTCAAATCCACCAATGTTCTCTTAGATGCCAATTTTGAAGCAAAGATATCTGATTTTGGGCTTGCCAAACTAATGCCAGAAGGACAGGAAACACATGTTACTGCCAGAGTACTTGGCACCTTTGGCTATTTTGACCCCGAGTATACTTCGACCGGAAAACTTACTCTACAAAGTGATGTTTATGCTTTTGGAGTTGTTCTTCTGGAGCTTTTGACAGGACGTCGAGCTGTAGATCTAAACCAGGGCCCAAATGATCAAAACCTTGTACTACAGGTGAGACATTTACTGAATGATCGGAAGAAGCTCCTTAAGGTGATAGATCCAGAGATGGCTCGAAATTCTTACACCATGGAATCTATATTCACATTTGCCAATCTAGCATCACGATGTGTCCGTAGTGAGAGCAATGAGAGACCTTCGATGGTGGATTGTGTCAAAGAAATCCAAATGATTATGTACACAAATTCAAAGGGCTTGGGAATGGTTATGCATAGGTTGAGATTGGTCTAA 1164 0.4089 MPFGLVSAWNKRRRSMSHDHSDPWIYKPAEFWQLEDQTPQPTKRRHRSSVFTLKEMEEATCSLSDDNLLGKGGFGRVYRATLKSGEVVAIKKMELPAIKAAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYDYMHNGNLQDHLNGKSCTQNPHYVKIFLHPTSIKQRLILGIGERKMDWPLRLKVAFGAAKGLAYLHSSSCLGIPIVHRDFKSTNVLLDANFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHLLNDRKKLLKVIDPEMARNSYTMESIFTFANLASRCVRSESNERPSMVDCVKEIQMIMYTNSKGLGMVMHRLRLV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02732 387 PIRSF ILK 181 377 - -
Gma08g02732 387 PIRSF ILK 29 170 - -
Gma08g02732 387 CDD STKc_IRAK 69 367 - -
Gma08g02732 387 PANTHER OS01G0750732 PROTEIN 1 154 - -
Gma08g02732 387 PANTHER OS01G0750732 PROTEIN 174 386 - -
Gma08g02732 387 SUPERFAMILY Protein kinase-like (PK-like) 49 372 IPR011009 -
Gma08g02732 387 ProSiteProfiles Protein kinase domain profile. 63 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02732 387 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 154 - -
Gma08g02732 387 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 174 386 - -
Gma08g02732 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Gma08g02732 387 Gene3D Phosphorylase Kinase; domain 1 30 141 - -
Gma08g02732 387 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Gma08g02732 387 Gene3D Transferase(Phosphotransferase) domain 1 142 379 - -
Gma08g02732 387 Pfam Protein kinase domain 65 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02732 Gma-Chr8 42884129 42888668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02732 50 366 Receptor kinase-like Gene Family AT3G58690 43.849 7.65e-85 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Gma08g02732 Pkinase 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02732 - - gmx:100820613 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02732 08 42884129 42888668 Gma08g02732 08 42884129 42888668 ECH