Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02702 ATGCTTTTCGAACAAGTCAGAACCGTTGAAATTGCTAAGCTTACTTGTGGCATCTATTTTGGAACGTATCCTTGTGCACAAGTTGAATCTGTTGCTTGTGATCACCCTTACTGCTATTCATGTTGGGCAGGACATATTGGCACATCAACTAATGATAGTCTGGGGTGTTTGGTGTTGAGATGTCCTAATCCCATTTGTGGTGCTGCTAATGGTCAAGATATGATTAAACTTTTAGCATATGATGAAGATAAAGAGAAGTATGACTATTACCTTCTCAAATCTTATATTGAAGACAACAAGAAGGAAGTGTTTGTGTCAAATAGTTTCAACATGGAAGGATACGTCTTGGCTTTGGGAATCCTGACTAGGCAAGGACTCATCCAGTGGCTACCTCTACTGCTCCAACAACTTTGGCTCTCCTTAGAGCAAGTGCCATTTGTGTTGGTAAAATTGTCATGGATGAAATGA 468 0.3996 MLFEQVRTVEIAKLTCGIYFGTYPCAQVESVACDHPYCYSCWAGHIGTSTNDSLGCLVLRCPNPICGAANGQDMIKLLAYDEDKEKYDYYLLKSYIEDNKKEVFVSNSFNMEGYVLALGILTRQGLIQWLPLLLQQLWLSLEQVPFVLVKLSWMK 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02702 155 ProSiteProfiles TRIAD supradomain profile. 12 155 IPR044066 -
Gma08g02702 155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 98 IPR013083 -
Gma08g02702 155 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 10 105 - -
Gma08g02702 155 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 10 105 IPR031127 GO:0004842|GO:0016567
Gma08g02702 155 SUPERFAMILY RING/U-box 14 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02702 Gma-Chr8 42366999 42370616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02702 12 101 C3H Transcription Factor Family AT2G31510 55.556 1.75e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02702 K11968 - gsj:114424178 192.971